RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 SNCBQ16143 134 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 DENND2CQ68D51 928 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 USP38Q8NB14 1042 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 JPH2Q9BR39 696 aaPredicted RBP10.29□□□□□ -0.76
TRERF1-201ENST00000340840 GJA3Q9Y6H8 435 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 USP17L5A8MUK1 530 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 FAM107AO95990 144 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 SMARCA1P28370 1054 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 EIF3BP55884 814 aaKnown RBP10.29□□□□□ -0.76
TRERF1-201ENST00000340840 COBLL1Q53SF7 1204 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 SLFN12Q8IYM2 578 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 CASKIN2Q8WXE0 1202 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 CEP95Q96GE4 821 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 PCDHB13Q9Y5F0 798 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 EPHB6O15197 1021 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 VIMP08670 466 aaKnown RBP10.29□□□□□ -0.76
TRERF1-201ENST00000340840 TTMPQ5BVD1 217 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 SMIM5Q71RC9 77 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 SYCP3Q8IZU3 236 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 TBC1D22AQ8WUA7 517 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 SH3GL2Q99962 352 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.29□□□□□ -0.76
TRERF1-201ENST00000340840 ISCUQ9H1K1 167 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 CCDC169A6NNP5 214 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 SART1O43290 800 aaKnown RBP10.29□□□□□ -0.76
TRERF1-201ENST00000340840 CYTH3O43739 400 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 GCNT3O95395 438 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 PPP2R2AP63151 447 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 UBE2SQ16763 222 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 CALR3Q96L12 384 aaKnown RBP10.29□□□□□ -0.76
TRERF1-201ENST00000340840 DDX47Q9H0S4 455 aaKnown RBP10.29□□□□□ -0.76
TRERF1-201ENST00000340840 SLITRK6Q9H5Y7 841 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 GDF3Q9NR23 364 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 MTUS1Q9ULD2 1270 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 A0A087X0T9 212 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 PNMA6FA0A0J9YX94 578 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 RGS16O15492 202 aaPredicted RBP10.28□□□□□ -0.76
TRERF1-201ENST00000340840 FAM228BP0C875 321 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 KLRK1P26718 216 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 SEC24CP53992 1094 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 MFSD14BQ5SR56 506 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 GPATCH4Q5T3I0 446 aaKnown RBP10.28□□□□□ -0.76
TRERF1-201ENST00000340840 MYCBPAPQ8TBZ2 947 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 PLVAPQ9BX97 442 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 ATP8A1Q9Y2Q0 1164 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 TJP1Q07157 1748 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 PKD1L3Q7Z443 1732 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 USP11P51784 963 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 NEDD9Q14511 834 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 SLC15A2Q16348 729 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 PPP1R18Q6NYC8 613 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 DPP8Q6V1X1 898 aaPredicted RBP10.28□□□□□ -0.76
TRERF1-201ENST00000340840 ZNF572Q7Z3I7 529 aaPredicted RBP10.28□□□□□ -0.76
TRERF1-201ENST00000340840 UBL4BQ8N7F7 174 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 FMO2Q99518 471 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 KANSL2Q9H9L4 492 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 GGA1Q9UJY5 639 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 FRMD4BQ9Y2L6 1034 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 NOC2LQ9Y3T9 749 aaKnown RBP10.28□□□□□ -0.76
TRERF1-201ENST00000340840 FLT1P17948 1338 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 LMNB1P20700 586 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 ABCB4P21439 1286 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 SLC8A1P32418 973 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 SEL1L2Q5TEA6 688 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 CCDC197Q8NCU1 140 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 BAP1Q92560 729 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 MXD3Q9BW11 206 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 TCEAL9Q9UHQ7 104 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 FBXL5Q9UKA1 691 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 DAAM1Q9Y4D1 1078 aa10.28□□□□□ -0.76
TRERF1-201ENST00000340840 MYH6P13533 1939 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 AKAP11Q9UKA4 1901 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 A0A1B0GUA9 196 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 ZSCAN5CA6NGD5 496 aaPredicted RBP10.27□□□□□ -0.76
TRERF1-201ENST00000340840 E9PMD0 336 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 CTNND1O60716 968 aaKnown RBP10.27□□□□□ -0.76
TRERF1-201ENST00000340840 LCA5LO95447 670 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 EVX2Q03828 476 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 ITPK1Q13572 414 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 MEI1Q5TIA1 1274 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 MREGQ8N565 214 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 BLOC1S4Q9NUP1 217 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 PARP2Q9UGN5 583 aa10.27□□□□□ -0.76
TRERF1-201ENST00000340840 NUP188Q5SRE5 1749 aa10.27□□□□□ -0.77
TRERF1-201ENST00000340840 TMEM110-MUSTN1A8MSY1 372 aa10.27□□□□□ -0.77
TRERF1-201ENST00000340840 F8W031 263 aaPredicted RBP10.27□□□□□ -0.77
TRERF1-201ENST00000340840 FAM153BP0C7A2 387 aa10.27□□□□□ -0.77
TRERF1-201ENST00000340840 ANXA13P27216 316 aa10.27□□□□□ -0.77
TRERF1-201ENST00000340840 CALCOCO2Q13137 446 aa10.27□□□□□ -0.77
TRERF1-201ENST00000340840 PABPC4Q13310 644 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRERF1-201ENST00000340840 FAM153CQ494X1 144 aa10.27□□□□□ -0.77
TRERF1-201ENST00000340840 P3H4Q92791 437 aa10.27□□□□□ -0.77
TRERF1-201ENST00000340840 KLC4Q9NSK0 619 aa10.27□□□□□ -0.77
TRERF1-201ENST00000340840 FAM153AQ9UHL3 310 aa10.27□□□□□ -0.77
TRERF1-201ENST00000340840 WTIPA6NIX2 430 aaPredicted RBP10.27□□□□□ -0.77
TRERF1-201ENST00000340840 HSPA9P38646 679 aaKnown RBP10.27□□□□□ -0.77
TRERF1-201ENST00000340840 MAGOHP61326 146 aaKnown RBP10.27□□□□□ -0.77
TRERF1-201ENST00000340840 HDLBPQ00341 1268 aaKnown RBP10.27□□□□□ -0.77
TRERF1-201ENST00000340840 RBM26Q5T8P6 1007 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms