RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 RABGGTBP53611 331 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
VAPA-201ENST00000340541 PPP2R2DQ66LE6 453 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 DEFB128Q7Z7B8 93 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 OXER1Q8TDS5 423 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 TBCKQ8TEA7 893 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 AFAP1L1Q8TED9 768 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 WASF1Q92558 559 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 ASB2Q96Q27 587 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 SDF4Q9BRK5 362 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 TSPYL2Q9H2G4 693 aaPredicted RBP17.49■□□□□ 0.39
VAPA-201ENST00000340541 PRDM6Q9NQX0 595 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 THEGQ9P2T0 379 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 EMSYQ7Z589 1322 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 GBF1Q92538 1859 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 IPO5O00410 1097 aaKnown RBP17.48■□□□□ 0.39
VAPA-201ENST00000340541 LGR5O75473 907 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 ATG7O95352 703 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 SMIM10L2AP0DMW4 78 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 SMIM10L2BP0DMW5 78 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 ACTR2P61160 394 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 MRPS5P82675 430 aaKnown RBP17.48■□□□□ 0.39
VAPA-201ENST00000340541 SETQ01105 290 aaPredicted RBP17.48■□□□□ 0.39
VAPA-201ENST00000340541 RBL2Q08999 1139 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 PRR16Q569H4 304 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 CCDC83Q8IWF9 413 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 WNT8BQ93098 351 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 ZSCAN31Q96LW9 406 aaPredicted RBP17.48■□□□□ 0.39
VAPA-201ENST00000340541 UIMC1Q96RL1 719 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 RNPEPQ9H4A4 650 aa17.48■□□□□ 0.39
VAPA-201ENST00000340541 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
VAPA-201ENST00000340541 SPTBN5Q9NRC6 3674 aaKnown RBP17.48■□□□□ 0.39
VAPA-201ENST00000340541 TTC28Q96AY4 2481 aa17.47■□□□□ 0.39
VAPA-201ENST00000340541 XBP1P17861 261 aa17.47■□□□□ 0.39
VAPA-201ENST00000340541 ADAM17P78536 824 aa17.47■□□□□ 0.39
VAPA-201ENST00000340541 TRIM71Q2Q1W2 868 aaKnown RBP17.47■□□□□ 0.39
VAPA-201ENST00000340541 KRT25Q7Z3Z0 450 aa17.47■□□□□ 0.39
VAPA-201ENST00000340541 PPM1EQ8WY54 764 aa17.47■□□□□ 0.39
VAPA-201ENST00000340541 TNFRSF25Q93038 417 aa17.47■□□□□ 0.39
VAPA-201ENST00000340541 MBOAT7Q96N66 472 aa17.47■□□□□ 0.39
VAPA-201ENST00000340541 LLPHQ9BRT6 129 aaKnown RBP17.47■□□□□ 0.39
VAPA-201ENST00000340541 ZNF577Q9BSK1 485 aa17.47■□□□□ 0.39
VAPA-201ENST00000340541 FTOQ9C0B1 505 aaKnown RBP eCLIP17.47■□□□□ 0.398e-8■□□□□ 8.7
VAPA-201ENST00000340541 ZNF215Q9UL58 517 aaPredicted RBP17.47■□□□□ 0.39
VAPA-201ENST00000340541 CYP3A7-CYP3A51PA0A087WV96 503 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 IGKV6D-21A0A0A0MT36 114 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 C17orf102A2RUQ5 167 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 TNFRSF10AO00220 468 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 MSH4O15457 936 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 CD2BP2O95400 341 aaKnown RBP17.46■□□□□ 0.39
VAPA-201ENST00000340541 TDP2O95551 362 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 CYP3A7P24462 503 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 PTK7Q13308 1070 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 NONOQ15233 471 aaKnown RBP eCLIP17.46■□□□□ 0.392e-7■■□□□ 12.8
VAPA-201ENST00000340541 INF2Q27J81 1249 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 EARS2Q5JPH6 523 aaKnown RBP17.46■□□□□ 0.39
VAPA-201ENST00000340541 TRAF7Q6Q0C0 670 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 SERINC5Q86VE9 423 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 BACH2Q9BYV9 841 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 SH2B1Q9NRF2 756 aaPredicted RBP17.46■□□□□ 0.39
VAPA-201ENST00000340541 SETD4Q9NVD3 440 aa17.46■□□□□ 0.39
VAPA-201ENST00000340541 CHD7Q9P2D1 2997 aa17.46■□□□□ 0.38
VAPA-201ENST00000340541 TET1Q8NFU7 2136 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 KAT6AQ92794 2004 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
VAPA-201ENST00000340541 MYOGP15173 224 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 SELPP16109 830 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 GPNMBQ14956 572 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 Q4G0T1 1027 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 MOXD1Q6UVY6 613 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 ABHD15Q6UXT9 468 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 HERC6Q8IVU3 1022 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 SLC5A5Q92911 643 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 SMARCAD1Q9H4L7 1026 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 TBC1D22BQ9NU19 505 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 ERAP1Q9NZ08 941 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 WDR81Q562E7 1941 aa17.45■□□□□ 0.38
VAPA-201ENST00000340541 FAM205CA6NFA0 338 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 TREHO43280 583 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 MMP1P03956 469 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 CA3P07451 260 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 MARK3P27448 753 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 NR5A1Q13285 461 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 CCDC85BQ15834 202 aaPredicted RBP17.44■□□□□ 0.38
VAPA-201ENST00000340541 AAK1Q2M2I8 961 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 KRT40Q6A162 431 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 PLPPR4Q7Z2D5 763 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 LMBR1Q8WVP7 490 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 GLG1Q92896 1179 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 ATP6V0A1Q93050 837 aa17.44■□□□□ 0.38
VAPA-201ENST00000340541 TRANK1O15050 2925 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 CCDC194A0A1B0GVG4 234 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 RBAK-RBAKDNI3L0D1 243 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 GTPBP6O43824 516 aaPredicted RBP17.43■□□□□ 0.38
VAPA-201ENST00000340541 ST18O60284 1047 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 EFCAB14O75071 495 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 CXCL10P02778 98 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 CKBP12277 381 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 KRT2P35908 639 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms