RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 TBX21Q9UL17 535 aa14.5□□□□□ -0.09
SRSF3-201ENST00000339436 MTMR6Q9Y217 621 aa14.5□□□□□ -0.09
SRSF3-201ENST00000339436 PCDHA10Q9Y5I2 948 aa14.5□□□□□ -0.09
SRSF3-201ENST00000339436 BACH1O14867 736 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 TLR3O15455 904 aaKnown RBP14.49□□□□□ -0.09
SRSF3-201ENST00000339436 STX6O43752 255 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 MARCH6O60337 910 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 PSAPP07602 524 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 SMIM10L2AP0DMW4 78 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 SMIM10L2BP0DMW5 78 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 MARK3P27448 753 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 SLC26A2P50443 739 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 STAT5BP51692 787 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 SPIRE1Q08AE8 756 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 BECN1Q14457 450 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 ZNF174Q15697 407 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 FAM160B1Q5W0V3 765 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 GDF6Q6KF10 455 aaPredicted RBP14.49□□□□□ -0.09
SRSF3-201ENST00000339436 PLPPR4Q7Z2D5 763 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 FERMT3Q86UX7 667 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 PRDM5Q9NQX1 630 aaPredicted RBP14.49□□□□□ -0.09
SRSF3-201ENST00000339436 ZNF302Q9NR11 478 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 ZMYND8Q9ULU4 1186 aaPredicted RBP14.49□□□□□ -0.09
SRSF3-201ENST00000339436 SAMM50Q9Y512 469 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 PCDHB6Q9Y5E3 794 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 TET1Q8NFU7 2136 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 TCHHQ07283 1943 aa14.49□□□□□ -0.09
SRSF3-201ENST00000339436 H0YGN5 161 aa14.48□□□□□ -0.09
SRSF3-201ENST00000339436 BAG4O95429 457 aaKnown RBP14.48□□□□□ -0.09
SRSF3-201ENST00000339436 OR52Z1P0C646 297 aa14.48□□□□□ -0.09
SRSF3-201ENST00000339436 MIER3Q7Z3K6 550 aa14.48□□□□□ -0.09
SRSF3-201ENST00000339436 SH3RF1Q7Z6J0 888 aa14.48□□□□□ -0.09
SRSF3-201ENST00000339436 CTAGE1Q96RT6 745 aa14.48□□□□□ -0.09
SRSF3-201ENST00000339436 RNPEPQ9H4A4 650 aa14.48□□□□□ -0.09
SRSF3-201ENST00000339436 MAFBQ9Y5Q3 323 aaPredicted RBP14.48□□□□□ -0.09
SRSF3-201ENST00000339436 TRIM43BA6NCK2 446 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 EML1O00423 815 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 KIAA0355O15063 1070 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 SYN1P17600 705 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 RESTQ13127 1097 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 HIC1Q14526 733 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 PLCB4Q15147 1175 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 PTGISQ16647 500 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 SWSAP1Q6NVH7 229 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 PDXDC2PQ6P474 469 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 LMBR1Q8WVP7 490 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 TRIM43Q96BQ3 446 aaPredicted RBP14.47□□□□□ -0.09
SRSF3-201ENST00000339436 TTC12Q9H892 705 aaPredicted RBP14.47□□□□□ -0.09
SRSF3-201ENST00000339436 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.47□□□□□ -0.09
SRSF3-201ENST00000339436 TMEM39AQ9NV64 488 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 GABBR1Q9UBS5 961 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 PRKAG2Q9UGJ0 569 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 NRCAMQ92823 1304 aa14.47□□□□□ -0.09
SRSF3-201ENST00000339436 TXKP42681 527 aa14.46□□□□□ -0.09
SRSF3-201ENST00000339436 PPFIA1Q13136 1202 aa14.46□□□□□ -0.09
SRSF3-201ENST00000339436 UGCGQ16739 394 aa14.46□□□□□ -0.09
SRSF3-201ENST00000339436 C4orf32Q8N8J7 132 aa14.46□□□□□ -0.09
SRSF3-201ENST00000339436 ATP8B4Q8TF62 1192 aa14.46□□□□□ -0.09
SRSF3-201ENST00000339436 PCDH10Q9P2E7 1040 aa14.46□□□□□ -0.09
SRSF3-201ENST00000339436 PCDHA12Q9UN75 941 aa14.46□□□□□ -0.09
SRSF3-201ENST00000339436 TRPC6Q9Y210 931 aa14.46□□□□□ -0.09
SRSF3-201ENST00000339436 NOD1Q9Y239 953 aa14.46□□□□□ -0.09
SRSF3-201ENST00000339436 POTEB3A0JP26 581 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 C17orf102A2RUQ5 167 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 CYP2C9P11712 490 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 PDIA4P13667 645 aaKnown RBP14.46□□□□□ -0.1
SRSF3-201ENST00000339436 ATP4AP20648 1035 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 PRKCEQ02156 737 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 PTGDRQ13258 359 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 GRIK4Q16099 956 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 NCAPH2Q6IBW4 605 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 POTEBQ6S5H4 581 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 ATP6V0A1Q93050 837 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 NOC4LQ9BVI4 516 aaKnown RBP14.46□□□□□ -0.1
SRSF3-201ENST00000339436 SETD4Q9NVD3 440 aa14.46□□□□□ -0.1
SRSF3-201ENST00000339436 POTEMA6NI47 508 aa14.45□□□□□ -0.1
SRSF3-201ENST00000339436 LAD1O00515 517 aa14.45□□□□□ -0.1
SRSF3-201ENST00000339436 ZNF862O60290 1169 aa14.45□□□□□ -0.1
SRSF3-201ENST00000339436 GNAT1P11488 350 aa14.45□□□□□ -0.1
SRSF3-201ENST00000339436 ITGB8P26012 769 aa14.45□□□□□ -0.1
SRSF3-201ENST00000339436 ADAM17P78536 824 aa14.45□□□□□ -0.1
SRSF3-201ENST00000339436 ZNF200P98182 395 aaPredicted RBP14.45□□□□□ -0.1
SRSF3-201ENST00000339436 ATP2C1P98194 919 aaPredicted RBP14.45□□□□□ -0.1
SRSF3-201ENST00000339436 PRPF38BQ5VTL8 546 aaKnown RBP14.45□□□□□ -0.1
SRSF3-201ENST00000339436 SERINC5Q86VE9 423 aa14.45□□□□□ -0.1
SRSF3-201ENST00000339436 FAM167AQ96KS9 214 aa14.45□□□□□ -0.1
SRSF3-201ENST00000339436 HIPK3Q9H422 1215 aa14.45□□□□□ -0.1
SRSF3-201ENST00000339436 COL1A2P08123 1366 aa14.44□□□□□ -0.1
SRSF3-201ENST00000339436 MBLAC1A4D2B0 266 aaPredicted RBP14.44□□□□□ -0.1
SRSF3-201ENST00000339436 TREHO43280 583 aa14.44□□□□□ -0.1
SRSF3-201ENST00000339436 HBP1O60381 514 aa14.44□□□□□ -0.1
SRSF3-201ENST00000339436 OATP04181 439 aa14.44□□□□□ -0.1
SRSF3-201ENST00000339436 INSRRP14616 1297 aa14.44□□□□□ -0.1
SRSF3-201ENST00000339436 RAG1P15918 1043 aa14.44□□□□□ -0.1
SRSF3-201ENST00000339436 PRPHP41219 470 aa14.44□□□□□ -0.1
SRSF3-201ENST00000339436 PKP1Q13835 747 aa14.44□□□□□ -0.1
SRSF3-201ENST00000339436 CKAP2LQ8IYA6 745 aa14.44□□□□□ -0.1
SRSF3-201ENST00000339436 BANK1Q8NDB2 785 aa14.44□□□□□ -0.1
SRSF3-201ENST00000339436 BBXQ8WY36 941 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms