RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 PCDHA6Q9UN73 950 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 PCDHA8Q9Y5H6 950 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 UBIAD1Q9Y5Z9 338 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 TAF6LQ9Y6J9 622 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 XIRP2A4UGR9 3374 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 MBLAC1A4D2B0 266 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-202ENST00000338995 FAM86C2PA6NEL3 165 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 SH2B2O14492 632 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-202ENST00000338995 PLEKHA8P1O95397 391 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 IGBP1P78318 339 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 MRPS6P82932 125 aaKnown RBP16.27■□□□□ 0.2
COMMD4-202ENST00000338995 NAALADL2Q58DX5 795 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 FBXO47Q5MNV8 452 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 RUFY4Q6ZNE9 571 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 NME8Q8N427 588 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 FANCBQ8NB91 859 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 KHSRPQ92945 711 aaKnown RBP eCLIP16.27■□□□□ 0.2
COMMD4-202ENST00000338995 UIMC1Q96RL1 719 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 POP1Q99575 1024 aaKnown RBP16.27■□□□□ 0.2
COMMD4-202ENST00000338995 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-202ENST00000338995 SUPT16HQ9Y5B9 1047 aaKnown RBP16.27■□□□□ 0.2
COMMD4-202ENST00000338995 CDY2AQ9Y6F7 541 aa16.27■□□□□ 0.2
COMMD4-202ENST00000338995 COL4A4P53420 1690 aaPredicted RBP16.27■□□□□ 0.19
COMMD4-202ENST00000338995 ADGRA3Q8IWK6 1321 aa16.26■□□□□ 0.19
COMMD4-202ENST00000338995 DCXO43602 365 aa16.26■□□□□ 0.19
COMMD4-202ENST00000338995 FOSP01100 380 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-202ENST00000338995 INSRRP14616 1297 aa16.26■□□□□ 0.19
COMMD4-202ENST00000338995 MGAT3Q09327 533 aa16.26■□□□□ 0.19
COMMD4-202ENST00000338995 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
COMMD4-202ENST00000338995 CCDC82Q8N4S0 544 aa16.26■□□□□ 0.19
COMMD4-202ENST00000338995 CLP1Q92989 425 aaKnown RBP16.26■□□□□ 0.19
COMMD4-202ENST00000338995 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
COMMD4-202ENST00000338995 PKD2L1Q9P0L9 805 aa16.26■□□□□ 0.19
COMMD4-202ENST00000338995 SLC9A2Q9UBY0 812 aa16.26■□□□□ 0.19
COMMD4-202ENST00000338995 TRPC6Q9Y210 931 aa16.26■□□□□ 0.19
COMMD4-202ENST00000338995 DGKIO75912 1065 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-202ENST00000338995 STAT5BP51692 787 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 COL19A1Q14993 1142 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 ODR4Q5SWX8 454 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 RNF20Q5VTR2 975 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 PLPPR4Q7Z2D5 763 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 ADHFE1Q8IWW8 467 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 CMTR1Q8N1G2 835 aaKnown RBP16.25■□□□□ 0.19
COMMD4-202ENST00000338995 MXRA8Q9BRK3 442 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 FAM49AQ9H0Q0 323 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-202ENST00000338995 C11orf16Q9NQ32 467 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 LRFN2Q9ULH4 789 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 TELO2Q9Y4R8 837 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 PCDHA2Q9Y5H9 948 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 TRPV2Q9Y5S1 764 aa16.25■□□□□ 0.19
COMMD4-202ENST00000338995 GRM6O15303 877 aa16.24■□□□□ 0.19
COMMD4-202ENST00000338995 RXRAP19793 462 aa16.24■□□□□ 0.19
COMMD4-202ENST00000338995 ZNF76P36508 570 aa16.24■□□□□ 0.19
COMMD4-202ENST00000338995 SLC26A2P50443 739 aa16.24■□□□□ 0.19
COMMD4-202ENST00000338995 UBE2SQ16763 222 aa16.24■□□□□ 0.19
COMMD4-202ENST00000338995 MARCH8Q5T0T0 291 aa16.24■□□□□ 0.19
COMMD4-202ENST00000338995 NPAS4Q8IUM7 802 aa16.24■□□□□ 0.19
COMMD4-202ENST00000338995 CMTR2Q8IYT2 770 aaKnown RBP16.24■□□□□ 0.19
COMMD4-202ENST00000338995 P2RX5Q93086 422 aa16.24■□□□□ 0.19
COMMD4-202ENST00000338995 ZNF689Q96CS4 500 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-202ENST00000338995 IGFLR1Q9H665 355 aa16.24■□□□□ 0.19
COMMD4-202ENST00000338995 KCNH7Q9NS40 1196 aa16.24■□□□□ 0.19
COMMD4-202ENST00000338995 RBM28Q9NW13 759 aaKnown RBP16.24■□□□□ 0.19
COMMD4-202ENST00000338995 NFASCO94856 1347 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 SLC27A2O14975 620 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 CD52P31358 61 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 ZP2Q05996 745 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 PAK2Q13177 524 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 CTC1Q2NKJ3 1217 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 CREB3L3Q68CJ9 461 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 TMTC3Q6ZXV5 915 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 CELF4Q9BZC1 486 aaKnown RBP16.23■□□□□ 0.19
COMMD4-202ENST00000338995 PLAGL2Q9UPG8 496 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 COL4A6Q14031 1691 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 MYO7AQ13402 2215 aa16.23■□□□□ 0.19
COMMD4-202ENST00000338995 hCG_1642624A0A1W2PR95 340 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 POTEB3A0JP26 581 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 MMP1P03956 469 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 NAPAP54920 295 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 ACTR2P61160 394 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 KRT76Q01546 638 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 CEP55Q53EZ4 464 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 FAM160B1Q5W0V3 765 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 POTEBQ6S5H4 581 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 SGMS1Q86VZ5 419 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 LSG1Q9H089 658 aaKnown RBP16.22■□□□□ 0.19
COMMD4-202ENST00000338995 KCNH6Q9H252 994 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 AGO3Q9H9G7 860 aaKnown RBP16.22■□□□□ 0.19
COMMD4-202ENST00000338995 ALG13Q9NP73 1137 aaKnown RBP16.22■□□□□ 0.19
COMMD4-202ENST00000338995 RIC8AQ9NPQ8 531 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 AAASQ9NRG9 546 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 CD207Q9UJ71 328 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 PADI3Q9ULW8 664 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 PCDHB7Q9Y5E2 793 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 TTC3P53804 2025 aa16.22■□□□□ 0.19
COMMD4-202ENST00000338995 DOCK5Q9H7D0 1870 aa16.21■□□□□ 0.19
COMMD4-202ENST00000338995 SMIM35A0A1B0GVV1 85 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 469.4 ms