RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 TAB2Q9NYJ8 693 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 SEL1LQ9UBV2 794 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 TCEAL9Q9UHQ7 104 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 ODF2LQ9ULJ1 636 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 PFASO15067 1338 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 ARHGAP6O43182 974 aa18.02■□□□□ 0.48
HPS1-202ENST00000338546 TBCAO75347 108 aaKnown RBP18.02■□□□□ 0.48
HPS1-202ENST00000338546 GNA14O95837 355 aa18.02■□□□□ 0.48
HPS1-202ENST00000338546 MYCLP12524 364 aaPredicted RBP18.02■□□□□ 0.48
HPS1-202ENST00000338546 ITGB3BPQ13352 177 aaPredicted RBP18.02■□□□□ 0.48
HPS1-202ENST00000338546 BMT2Q1RMZ1 405 aa18.02■□□□□ 0.48
HPS1-202ENST00000338546 EDRF1Q3B7T1 1238 aa18.02■□□□□ 0.48
HPS1-202ENST00000338546 TREML2Q5T2D2 321 aa18.02■□□□□ 0.48
HPS1-202ENST00000338546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.02■□□□□ 0.48
HPS1-202ENST00000338546 CNOT6LQ96LI5 555 aaKnown RBP18.02■□□□□ 0.48
HPS1-202ENST00000338546 LXNQ9BS40 222 aa18.02■□□□□ 0.48
HPS1-202ENST00000338546 A1CFQ9NQ94 594 aaKnown RBP18.02■□□□□ 0.48
HPS1-202ENST00000338546 DBR1Q9UK59 544 aaKnown RBP18.02■□□□□ 0.48
HPS1-202ENST00000338546 TUBB4AP04350 444 aa18.01■□□□□ 0.47
HPS1-202ENST00000338546 GUCY2CP25092 1073 aa18.01■□□□□ 0.47
HPS1-202ENST00000338546 UBXN1Q04323 297 aa18.01■□□□□ 0.47
HPS1-202ENST00000338546 LDLRAD1Q5T700 205 aa18.01■□□□□ 0.47
HPS1-202ENST00000338546 ZNF746Q6NUN9 644 aaPredicted RBP18.01■□□□□ 0.47
HPS1-202ENST00000338546 EPM2AIP1Q7L775 607 aaPredicted RBP18.01■□□□□ 0.47
HPS1-202ENST00000338546 ZC3H3Q8IXZ2 948 aaKnown RBP18.01■□□□□ 0.47
HPS1-202ENST00000338546 RETREG2Q8NC44 543 aa18.01■□□□□ 0.47
HPS1-202ENST00000338546 SCFD1Q8WVM8 642 aa18.01■□□□□ 0.47
HPS1-202ENST00000338546 AGTPBP1Q9UPW5 1226 aa18.01■□□□□ 0.47
HPS1-202ENST00000338546 NPHP3-ACAD11A0A0J9YXS1 232 aa18■□□□□ 0.47
HPS1-202ENST00000338546 WDR64B1ANS9 1081 aa18■□□□□ 0.47
HPS1-202ENST00000338546 QARSP47897 775 aaKnown RBP18■□□□□ 0.47
HPS1-202ENST00000338546 TTLL12Q14166 644 aaPredicted RBP18■□□□□ 0.47
HPS1-202ENST00000338546 GNPTABQ3T906 1256 aa18■□□□□ 0.47
HPS1-202ENST00000338546 DLK2Q6UY11 383 aa18■□□□□ 0.47
HPS1-202ENST00000338546 GADL1Q6ZQY3 521 aa18■□□□□ 0.47
HPS1-202ENST00000338546 LRRC55Q6ZSA7 311 aa18■□□□□ 0.47
HPS1-202ENST00000338546 CCAR2Q8N163 923 aaKnown RBP18■□□□□ 0.47
HPS1-202ENST00000338546 C17orf53Q8N3J3 647 aaPredicted RBP18■□□□□ 0.47
HPS1-202ENST00000338546 OTUD5Q96G74 571 aa18■□□□□ 0.47
HPS1-202ENST00000338546 BAG1Q99933 345 aaPredicted RBP18■□□□□ 0.47
HPS1-202ENST00000338546 NUP58Q9BVL2 599 aa18■□□□□ 0.47
HPS1-202ENST00000338546 RUSC1Q9BVN2 902 aa18■□□□□ 0.47
HPS1-202ENST00000338546 TIPINQ9BVW5 301 aa18■□□□□ 0.47
HPS1-202ENST00000338546 NFASCO94856 1347 aa18■□□□□ 0.47
HPS1-202ENST00000338546 KIF2AO00139 706 aaPredicted RBP18■□□□□ 0.47
HPS1-202ENST00000338546 EIF3DO15371 548 aaKnown RBP eCLIP18■□□□□ 0.47
HPS1-202ENST00000338546 DKC1O60832 514 aaKnown RBP eCLIP18■□□□□ 0.47
HPS1-202ENST00000338546 SLC25A27O95847 323 aa18■□□□□ 0.47
HPS1-202ENST00000338546 MTIF2P46199 727 aaKnown RBP18■□□□□ 0.47
HPS1-202ENST00000338546 ZNF131P52739 623 aa18■□□□□ 0.47
HPS1-202ENST00000338546 MARSP56192 900 aaKnown RBP18■□□□□ 0.47
HPS1-202ENST00000338546 IRX3P78415 501 aaPredicted RBP18■□□□□ 0.47
HPS1-202ENST00000338546 PLS1Q14651 629 aa18■□□□□ 0.47
HPS1-202ENST00000338546 C4orf19Q8IY42 314 aa18■□□□□ 0.47
HPS1-202ENST00000338546 SMAP1Q8IYB5 467 aaPredicted RBP18■□□□□ 0.47
HPS1-202ENST00000338546 PIGOQ8TEQ8 1089 aa18■□□□□ 0.47
HPS1-202ENST00000338546 KCTD10Q9H3F6 313 aa18■□□□□ 0.47
HPS1-202ENST00000338546 TRAF3IP3Q9Y228 551 aa18■□□□□ 0.47
HPS1-202ENST00000338546 UBE4BO95155 1302 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 MFAP3LO75121 409 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 FAM13AO94988 1023 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
HPS1-202ENST00000338546 FECHP22830 423 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 RBL2Q08999 1139 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 LRRC41Q15345 812 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 MAN2A1Q16706 1144 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 DNTTIP2Q5QJE6 756 aaKnown RBP17.99■□□□□ 0.47
HPS1-202ENST00000338546 FKBP15Q5T1M5 1219 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 STXBP4Q6ZWJ1 553 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 CREBRFQ8IUR6 639 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 TMEM139Q8IV31 216 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 GTF3C2Q8WUA4 911 aaPredicted RBP17.99■□□□□ 0.47
HPS1-202ENST00000338546 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 ZFP91Q96JP5 570 aaPredicted RBP17.99■□□□□ 0.47
HPS1-202ENST00000338546 NOC4LQ9BVI4 516 aaKnown RBP17.99■□□□□ 0.47
HPS1-202ENST00000338546 SPATC1LQ9H0A9 340 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 PARVGQ9HBI0 331 aa17.99■□□□□ 0.47
HPS1-202ENST00000338546 TESPA1A2RU30 521 aaPredicted RBP17.98■□□□□ 0.47
HPS1-202ENST00000338546 ARHGEF35A5YM69 484 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 B4DLN1 442 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 PDXKO00764 312 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 OSBPP22059 807 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 ICAM3P32942 547 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 PSMC5P62195 406 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 KNOP1Q1ED39 458 aaKnown RBP17.98■□□□□ 0.47
HPS1-202ENST00000338546 EAPPQ56P03 285 aaPredicted RBP17.98■□□□□ 0.47
HPS1-202ENST00000338546 FIGNQ5HY92 759 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 SFR1Q86XK3 245 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 CLMNQ96JQ2 1002 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 ERGIC2Q96RQ1 377 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 ZHX3Q9H4I2 956 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 ANKEF1Q9NU02 776 aa17.98■□□□□ 0.47
HPS1-202ENST00000338546 SPATA31C2B4DYI2 1134 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 ZSCAN12O43309 604 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 CALUO43852 315 aaPredicted RBP17.97■□□□□ 0.47
HPS1-202ENST00000338546 EIF3JO75822 258 aaKnown RBP17.97■□□□□ 0.47
HPS1-202ENST00000338546 GYPCP04921 128 aa17.97■□□□□ 0.47
HPS1-202ENST00000338546 MAPTP10636 758 aaKnown RBP17.97■□□□□ 0.47
HPS1-202ENST00000338546 ADKP55263 362 aaKnown RBP17.97■□□□□ 0.47
HPS1-202ENST00000338546 HERVK_113P62684 666 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms