RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 FOXR2Q6PJQ5 311 aa17.2■□□□□ 0.34
LIMS1-202ENST00000338045 C1orf186Q6ZWK4 172 aa17.2■□□□□ 0.34
LIMS1-202ENST00000338045 BANK1Q8NDB2 785 aa17.2■□□□□ 0.34
LIMS1-202ENST00000338045 REEP2Q9BRK0 252 aa17.2■□□□□ 0.34
LIMS1-202ENST00000338045 RUSC1Q9BVN2 902 aa17.2■□□□□ 0.34
LIMS1-202ENST00000338045 INTS13Q9NVM9 706 aa17.2■□□□□ 0.34
LIMS1-202ENST00000338045 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.2■□□□□ 0.34
LIMS1-202ENST00000338045 NRBP1Q9UHY1 535 aa17.2■□□□□ 0.34
LIMS1-202ENST00000338045 ZKSCAN5Q9Y2L8 839 aa17.2■□□□□ 0.34
LIMS1-202ENST00000338045 KIAA1217Q5T5P2 1943 aa17.2■□□□□ 0.34
LIMS1-202ENST00000338045 LRRC10BA6NIK2 292 aa17.19■□□□□ 0.34
LIMS1-202ENST00000338045 ESPNB1AK53 854 aa17.19■□□□□ 0.34
LIMS1-202ENST00000338045 COBLO75128 1261 aa17.19■□□□□ 0.34
LIMS1-202ENST00000338045 QARSP47897 775 aaKnown RBP17.19■□□□□ 0.34
LIMS1-202ENST00000338045 FSTL1Q12841 308 aa17.19■□□□□ 0.34
LIMS1-202ENST00000338045 TPD52L1Q16890 204 aaPredicted RBP17.19■□□□□ 0.34
LIMS1-202ENST00000338045 FGD4Q96M96 766 aa17.19■□□□□ 0.34
LIMS1-202ENST00000338045 DUSP9Q99956 384 aaKnown RBP17.19■□□□□ 0.34
LIMS1-202ENST00000338045 KCND2Q9NZV8 630 aa17.19■□□□□ 0.34
LIMS1-202ENST00000338045 IMPACTQ9P2X3 320 aa17.19■□□□□ 0.34
LIMS1-202ENST00000338045 A0A1B0GTH6 734 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 ZBTB39O15060 712 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 KRT18P05783 430 aaKnown RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 SPAG1Q07617 926 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 MKRN3Q13064 507 aaKnown RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 CCDC144BQ3MJ40 725 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 CCDC186Q7Z3E2 898 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 IRF2BP1Q8IU81 584 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 SMCR8Q8TEV9 937 aaPredicted RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 ZNF526Q8TF50 670 aaPredicted RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 NOC3LQ8WTT2 800 aaKnown RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 SEMA6BQ9H3T3 888 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 THAP9Q9H5L6 903 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 LIMA1Q9UHB6 759 aaKnown RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 TCEAL9Q9UHQ7 104 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 TRPM7Q96QT4 1865 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 LOXHD1Q8IVV2 1947 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 GCLCP48506 637 aaPredicted RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 HERC4Q5GLZ8 1057 aaPredicted RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 ANKRD40Q6AI12 368 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 C4orf19Q8IY42 314 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 SMAP1Q8IYB5 467 aaPredicted RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 GLIS3Q8NEA6 775 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 GPRC5AQ8NFJ5 357 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 CTAGE1Q96RT6 745 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 MORF4L1Q9UBU8 362 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 DBR1Q9UK59 544 aaKnown RBP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 SAMM50Q9Y512 469 aa17.18■□□□□ 0.34
LIMS1-202ENST00000338045 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.18■□□□□ 0.34
LIMS1-202ENST00000338045 PTGS1P23219 599 aa17.17■□□□□ 0.34
LIMS1-202ENST00000338045 RAD51AP2Q09MP3 1159 aa17.17■□□□□ 0.34
LIMS1-202ENST00000338045 KCTD2Q14681 263 aa17.17■□□□□ 0.34
LIMS1-202ENST00000338045 NR1I3Q14994 352 aa17.17■□□□□ 0.34
LIMS1-202ENST00000338045 MYOCDQ8IZQ8 938 aa17.17■□□□□ 0.34
LIMS1-202ENST00000338045 FAM43AQ8N2R8 423 aa17.17■□□□□ 0.34
LIMS1-202ENST00000338045 TRIM47Q96LD4 638 aa17.17■□□□□ 0.34
LIMS1-202ENST00000338045 MMP19Q99542 508 aa17.17■□□□□ 0.34
LIMS1-202ENST00000338045 PORCNQ9H237 461 aa17.17■□□□□ 0.34
LIMS1-202ENST00000338045 PCDHA10Q9Y5I2 948 aa17.17■□□□□ 0.34
LIMS1-202ENST00000338045 LRRC37A2A6NM11 1700 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 LOC102724159A0A0B4J2E5 919 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 B4DLN1 442 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 GUCY2CP25092 1073 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 HUNKP57058 714 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 PSMC5P62195 406 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 CCNA1P78396 465 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 PWP2Q15269 919 aaKnown RBP17.16■□□□□ 0.34
LIMS1-202ENST00000338045 TCP11X2Q5H9J9 407 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 VSTM4Q8IW00 320 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 PTPN18Q99952 460 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 FGFBP2Q9BYJ0 223 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 KCNF1Q9H3M0 494 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 JPH1Q9HDC5 661 aaPredicted RBP17.16■□□□□ 0.34
LIMS1-202ENST00000338045 GAP43P17677 238 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 ZNF131P52739 623 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 SP2Q02086 613 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 LRRC63Q05C16 580 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 UGCGQ16739 394 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 CSGALNACT2Q8N6G5 542 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 SRRTQ9BXP5 876 aaKnown RBP17.16■□□□□ 0.34
LIMS1-202ENST00000338045 EFCC1Q9HA90 598 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
LIMS1-202ENST00000338045 OLFML3Q9NRN5 406 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 SLC9A2Q9UBY0 812 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 ODF2LQ9ULJ1 636 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 COL4A3BPQ9Y5P4 624 aa17.16■□□□□ 0.34
LIMS1-202ENST00000338045 A0A0U1RQG5 324 aaPredicted RBP17.15■□□□□ 0.34
LIMS1-202ENST00000338045 ARHGEF35A5YM69 484 aa17.15■□□□□ 0.34
LIMS1-202ENST00000338045 RSPH10B2B2RC85 870 aa17.15■□□□□ 0.34
LIMS1-202ENST00000338045 KCNJ18B7U540 433 aa17.15■□□□□ 0.34
LIMS1-202ENST00000338045 TBCAO75347 108 aaKnown RBP17.15■□□□□ 0.34
LIMS1-202ENST00000338045 PGK2P07205 417 aa17.15■□□□□ 0.34
LIMS1-202ENST00000338045 RSPH10BP0C881 870 aa17.15■□□□□ 0.34
LIMS1-202ENST00000338045 RARRES1P49788 294 aa17.15■□□□□ 0.34
LIMS1-202ENST00000338045 KCNJ12Q14500 433 aa17.15■□□□□ 0.34
LIMS1-202ENST00000338045 KRT31Q15323 416 aa17.15■□□□□ 0.34
LIMS1-202ENST00000338045 LRRC41Q15345 812 aa17.15■□□□□ 0.34
LIMS1-202ENST00000338045 ZCWPW2Q504Y3 356 aa17.15■□□□□ 0.34
LIMS1-202ENST00000338045 EPM2AIP1Q7L775 607 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms