RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 MAFBQ9Y5Q3 323 aaPredicted RBP17.29■□□□□ 0.36
SEC13-201ENST00000337354 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
SEC13-201ENST00000337354 YEATS4O95619 227 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 P4HBP07237 508 aaKnown RBP17.28■□□□□ 0.36
SEC13-201ENST00000337354 PTPN11Q06124 597 aaPredicted RBP17.28■□□□□ 0.36
SEC13-201ENST00000337354 ITGA7Q13683 1181 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 NCAPH2Q6IBW4 605 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 NFRKBQ6P4R8 1299 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 SLC39A5Q6ZMH5 540 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 IGSF22Q8N9C0 903 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 ERMNQ8TAM6 284 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 NEK9Q8TD19 979 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 ATP6V0A1Q93050 837 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 PCYT2Q99447 389 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 TFIP11Q9UBB9 837 aaKnown RBP17.28■□□□□ 0.36
SEC13-201ENST00000337354 GABBR1Q9UBS5 961 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 EML1O00423 815 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 ZNF286BP0CG31 522 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 PSEN2P49810 448 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 CEBPZQ03701 1054 aaKnown RBP17.28■□□□□ 0.36
SEC13-201ENST00000337354 MFSD10Q14728 455 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 KIAA0753Q2KHM9 967 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 PDXDC2PQ6P474 469 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 SESTD1Q86VW0 696 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 CCDC60Q8IWA6 550 aaPredicted RBP17.28■□□□□ 0.36
SEC13-201ENST00000337354 SLC43A3Q8NBI5 491 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 LINC00301Q8NCQ3 95 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 DPF3Q92784 378 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 AK8Q96MA6 479 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 HSD17B14Q9BPX1 270 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 LRWD1Q9UFC0 647 aa17.28■□□□□ 0.36
SEC13-201ENST00000337354 MYH7BA7E2Y1 1941 aa17.27■□□□□ 0.36
SEC13-201ENST00000337354 KIAA1217Q5T5P2 1943 aa17.27■□□□□ 0.36
SEC13-201ENST00000337354 MKI67P46013 3256 aaKnown RBP17.27■□□□□ 0.35
SEC13-201ENST00000337354 ARVCFO00192 962 aa17.27■□□□□ 0.35
SEC13-201ENST00000337354 PPP6R2O75170 966 aa17.27■□□□□ 0.35
SEC13-201ENST00000337354 QARSP47897 775 aaKnown RBP17.27■□□□□ 0.35
SEC13-201ENST00000337354 CDK7P50613 346 aa17.27■□□□□ 0.35
SEC13-201ENST00000337354 PSMC5P62195 406 aa17.27■□□□□ 0.35
SEC13-201ENST00000337354 KRT85P78386 507 aa17.27■□□□□ 0.35
SEC13-201ENST00000337354 DNM1Q05193 864 aaKnown RBP17.27■□□□□ 0.35
SEC13-201ENST00000337354 SNX17Q15036 470 aa17.27■□□□□ 0.35
SEC13-201ENST00000337354 STK38Q15208 465 aa17.27■□□□□ 0.35
SEC13-201ENST00000337354 IL17AQ16552 155 aa17.27■□□□□ 0.35
SEC13-201ENST00000337354 NBPF20Q3BBV1 942 aa17.27■□□□□ 0.35
SEC13-201ENST00000337354 C7orf31Q8N865 590 aa17.27■□□□□ 0.35
SEC13-201ENST00000337354 FTOQ9C0B1 505 aaKnown RBP eCLIP17.27■□□□□ 0.35
SEC13-201ENST00000337354 SRPRBQ9Y5M8 271 aaKnown RBP17.27■□□□□ 0.35
SEC13-201ENST00000337354 GRIN2DO15399 1336 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 MROH7Q68CQ1 1323 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 VWA3AA6NCI4 1184 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 SLITRK3O94933 977 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 MUTP22033 750 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 LONP1P36776 959 aaKnown RBP17.26■□□□□ 0.35
SEC13-201ENST00000337354 PSMC6P62333 389 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 FOXD4L6Q3SYB3 417 aaPredicted RBP17.26■□□□□ 0.35
SEC13-201ENST00000337354 HAUS3Q68CZ6 603 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 FOXD4L3Q6VB84 417 aaPredicted RBP17.26■□□□□ 0.35
SEC13-201ENST00000337354 TRIM50Q86XT4 487 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 KCNG4Q8TDN1 519 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 BBXQ8WY36 941 aaPredicted RBP17.26■□□□□ 0.35
SEC13-201ENST00000337354 FAM167AQ96KS9 214 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 TOX2Q96NM4 488 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 EIF2AK1Q9BQI3 630 aaKnown RBP17.26■□□□□ 0.35
SEC13-201ENST00000337354 RNPEPQ9H4A4 650 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 ZSWIM4Q9H7M6 989 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 NRBP2Q9NSY0 501 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 RCOR1Q9UKL0 485 aa17.26■□□□□ 0.35
SEC13-201ENST00000337354 NRCAMQ92823 1304 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 IGSF9BQ9UPX0 1349 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 POTEMA6NI47 508 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 SPTLC2O15270 562 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 HBP1O60381 514 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 GNAT1P11488 350 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 KRT79Q5XKE5 535 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 C4orf19Q8IY42 314 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 CKAP2LQ8IYA6 745 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 KCTD17Q8N5Z5 321 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 ATP8B4Q8TF62 1192 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 POLR3CQ9BUI4 534 aaPredicted RBP17.25■□□□□ 0.35
SEC13-201ENST00000337354 SCAND2PQ9GZW5 306 aaPredicted RBP17.25■□□□□ 0.35
SEC13-201ENST00000337354 TUFT1Q9NNX1 390 aa17.25■□□□□ 0.35
SEC13-201ENST00000337354 POTEB3A0JP26 581 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 RRN3P2A6NIE6 340 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 SLC26A4O43511 780 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 LYPLA2O95372 231 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 XRCC6P12956 609 aaKnown RBP eCLIP17.24■□□□□ 0.35
SEC13-201ENST00000337354 ATP4AP20648 1035 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 RPA1P27694 616 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 MARCKSP29966 332 aaPredicted RBP17.24■□□□□ 0.35
SEC13-201ENST00000337354 ATN1P54259 1190 aaPredicted RBP17.24■□□□□ 0.35
SEC13-201ENST00000337354 CHMP4BP1P59074 171 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 PLCB4Q15147 1175 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 XKR3Q5GH77 459 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 PRPF38BQ5VTL8 546 aaKnown RBP17.24■□□□□ 0.35
SEC13-201ENST00000337354 POTEBQ6S5H4 581 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 ANKRD33Q7Z3H0 272 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 TPH2Q8IWU9 490 aa17.24■□□□□ 0.35
SEC13-201ENST00000337354 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
SEC13-201ENST00000337354 DYDC2Q96IM9 177 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms