RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 AMACRQ9UHK6 382 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 SLC12A6Q9UHW9 1150 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.01□□□□□ -0.01
SYNE3-201ENST00000334258 PCNTO95613 3336 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 USP17L3A6NCW0 530 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 USP17L4A6NCW7 530 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 SMIM23A6NLE4 172 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 MARCH6O60337 910 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 CTNND1O60716 968 aaKnown RBP15.01□□□□□ -0.01
SYNE3-201ENST00000334258 SLC8A1P32418 973 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 SSR1P43307 286 aaKnown RBP15.01□□□□□ -0.01
SYNE3-201ENST00000334258 USP17L1Q7RTZ2 530 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 TCP11Q8WWU5 503 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 EDEM3Q9BZQ6 932 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 BARHL2Q9NY43 387 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 COL4A3BPQ9Y5P4 624 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 FGRP09769 529 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 USP17L8P0C7I0 530 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 GCFC2P16383 781 aaKnown RBP15□□□□□ -0.01
SYNE3-201ENST00000334258 FLT3P36888 993 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 MTMR3Q13615 1198 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 KRT25Q7Z3Z0 450 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 SPAG5Q96R06 1193 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 SELENOSQ9BQE4 189 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 BIN2Q9UBW5 565 aaPredicted RBP15□□□□□ -0.01
SYNE3-201ENST00000334258 PCDHGC5Q9Y5F6 944 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 SRRM3A6NNA2 597 aaPredicted RBP15□□□□□ -0.01
SYNE3-201ENST00000334258 STXBP3O00186 592 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 CLSTN1O94985 981 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 CLTAP09496 248 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 FKBP3Q00688 224 aaKnown RBP15□□□□□ -0.01
SYNE3-201ENST00000334258 WLSQ5T9L3 541 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 GALNT17Q6IS24 598 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 MYOCDQ8IZQ8 938 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 CNBD1Q8NA66 436 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 TBCKQ8TEA7 893 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 DYNLL2Q96FJ2 89 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 NEUROG2Q9H2A3 272 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 ZHX3Q9H4I2 956 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 ATP8A1Q9Y2Q0 1164 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 KIF4AO95239 1232 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 TSPY3P0CV98 308 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 TSPY8P0CW00 308 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 PRDX5P30044 214 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 CLEC4GQ6UXB4 293 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 PROM2Q8N271 834 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 DDX12PQ92771 950 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 FAM84BQ96KN1 310 aaPredicted RBP15□□□□□ -0.01
SYNE3-201ENST00000334258 MMTAG2Q9BU76 263 aaKnown RBP15□□□□□ -0.01
SYNE3-201ENST00000334258 C6orf50Q9HD87 102 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 SWAP70Q9UH65 585 aa15□□□□□ -0.01
SYNE3-201ENST00000334258 PGRMC1O00264 195 aaKnown RBP14.99□□□□□ -0.01
SYNE3-201ENST00000334258 CYTH3O43739 400 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 BUB1BO60566 1050 aaPredicted RBP14.99□□□□□ -0.01
SYNE3-201ENST00000334258 INHBEP58166 350 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 MECOMQ03112 1051 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 LRRC55Q6ZSA7 311 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 FAM228AQ86W67 206 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 ANKS4BQ8N8V4 417 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.99□□□□□ -0.01
SYNE3-201ENST00000334258 PVALEFA0A1B0GWK0 134 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 KLRF2D3W0D1 207 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 M0R2N6 131 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 APBA3O96018 575 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 PRPF4BQ13523 1007 aaKnown RBP14.99□□□□□ -0.01
SYNE3-201ENST00000334258 TMEM266Q2M3C6 531 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 ARMC9Q7Z3E5 817 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 PEX26Q7Z412 305 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 ZNF444Q8N0Y2 327 aaPredicted RBP14.99□□□□□ -0.01
SYNE3-201ENST00000334258 C3orf20Q8ND61 904 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 SNX29Q8TEQ0 813 aa14.99□□□□□ -0.01
SYNE3-201ENST00000334258 FAM170AA1A519 330 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 H0YGN5 161 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 RBAK-RBAKDNI3L0D1 243 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 CALRP27797 417 aaKnown RBP14.98□□□□□ -0.01
SYNE3-201ENST00000334258 GNA11P29992 359 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 GRB10Q13322 594 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 CALCRLQ16602 461 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 CCDC197Q8NCU1 140 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 ZNF384Q8TF68 577 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 PSMD1Q99460 953 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 BLOC1S4Q9NUP1 217 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 ARPP21Q9UBL0 812 aaPredicted RBP14.98□□□□□ -0.01
SYNE3-201ENST00000334258 NFS1Q9Y697 457 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 POTEMA6NI47 508 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 NOL4O94818 638 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 ITGA4P13612 1032 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 IFI16Q16666 785 aaKnown RBP14.98□□□□□ -0.01
SYNE3-201ENST00000334258 KRT79Q5XKE5 535 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 DGKHQ86XP1 1220 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 CCDC26Q8TAB7 109 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 TATDN2Q93075 761 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 CHMP6Q96FZ7 201 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 RSRC1Q96IZ7 334 aaKnown RBP14.98□□□□□ -0.01
SYNE3-201ENST00000334258 PBKQ96KB5 322 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 CELF4Q9BZC1 486 aaKnown RBP14.98□□□□□ -0.01
SYNE3-201ENST00000334258 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 MAD2L2Q9UI95 211 aa14.98□□□□□ -0.01
SYNE3-201ENST00000334258 NOC2LQ9Y3T9 749 aaKnown RBP14.98□□□□□ -0.01
SYNE3-201ENST00000334258 RIMBP2O15034 1052 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms