RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 STX10O60499 249 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 TDP2O95551 362 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 GBP6Q6ZN66 633 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 CPLX4Q7Z7G2 160 aa12.96□□□□□ -0.33
HDAC6-201ENST00000334136 RRP15Q9Y3B9 282 aaKnown RBP12.96□□□□□ -0.33
HDAC6-201ENST00000334136 MIS18BP1Q6P0N0 1132 aa12.96□□□□□ -0.34
HDAC6-201ENST00000334136 SMYD4Q8IYR2 804 aaPredicted RBP12.96□□□□□ -0.34
HDAC6-201ENST00000334136 SLC35F6Q8N357 371 aa12.96□□□□□ -0.34
HDAC6-201ENST00000334136 METTL13Q8N6R0 699 aa12.96□□□□□ -0.34
HDAC6-201ENST00000334136 FAM20AQ96MK3 541 aa12.96□□□□□ -0.34
HDAC6-201ENST00000334136 GOLPH3LQ9H4A5 285 aa12.96□□□□□ -0.34
HDAC6-201ENST00000334136 FCGRTP55899 365 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 PAK1Q13153 545 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 DGKZQ13574 1117 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 ARL6IP4Q66PJ3 421 aaKnown RBP12.95□□□□□ -0.34
HDAC6-201ENST00000334136 PLEKHH3Q7Z736 793 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 CSGALNACT2Q8N6G5 542 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 GOLGA5Q8TBA6 731 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 SUGCTQ9HAC7 445 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 TBC1D22BQ9NU19 505 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 KIF28PB7ZC32 967 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 FMR1Q06787 632 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■□ 22.5
HDAC6-201ENST00000334136 NEDD9Q14511 834 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 C8orf74Q6P047 294 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 CTNNBL1Q8WYA6 563 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-201ENST00000334136 NOC4LQ9BVI4 516 aaKnown RBP12.95□□□□□ -0.34
HDAC6-201ENST00000334136 IPO5O00410 1097 aaKnown RBP12.95□□□□□ -0.34
HDAC6-201ENST00000334136 MAPK4P31152 587 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 IGBP1P78318 339 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-201ENST00000334136 PDXDC2PQ6P474 469 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 TAAR1Q96RJ0 339 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 FAM204AQ9H8W3 233 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 SAR1BQ9Y6B6 198 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 SNCAIPQ9Y6H5 919 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 FAM170AA1A519 330 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 FAM205CA6NFA0 338 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 CASP14P31944 242 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 SPRYD7Q5W111 196 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 SRGAP1Q7Z6B7 1085 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 GPBP1Q86WP2 473 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 GIMAP8Q8ND71 665 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-201ENST00000334136 BCAS4Q8TDM0 211 aa12.95□□□□□ -0.34
HDAC6-201ENST00000334136 FAM217BQ9NTX9 383 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-201ENST00000334136 SRPRBQ9Y5M8 271 aaKnown RBP12.95□□□□□ -0.34
HDAC6-201ENST00000334136 DUOX1Q9NRD9 1551 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 NFIBO00712 420 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 CYTH3O43739 400 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 PSAPP07602 524 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 ATP1A2P50993 1020 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 MYCT1Q8N699 235 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 SAMSN1Q9NSI8 373 aaKnown RBP12.94□□□□□ -0.34
HDAC6-201ENST00000334136 CDC23Q9UJX2 597 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 MORC2Q9Y6X9 1032 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-201ENST00000334136 SOWAHDA6NJG2 315 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 ACTN2P35609 894 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-201ENST00000334136 ADAM21Q9UKJ8 722 aa12.94□□□□□ -0.34
HDAC6-201ENST00000334136 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
HDAC6-201ENST00000334136 ZBTB48P10074 688 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-201ENST00000334136 TXNP10599 105 aaKnown RBP12.93□□□□□ -0.34
HDAC6-201ENST00000334136 E2F4Q16254 413 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 SARM1Q6SZW1 724 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 POTEDQ86YR6 584 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 CAPNS2Q96L46 248 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 TEPSINQ96N21 525 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 NACC1Q96RE7 527 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 SLC38A10Q9HBR0 1119 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 MYH13Q9UKX3 1938 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 PGK2P07205 417 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 CCT5P48643 541 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 OAZ1P54368 228 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 KRT76Q01546 638 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 MEIS1O00470 390 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 HGSO14964 777 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-201ENST00000334136 TAL1P17542 331 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-201ENST00000334136 POLGP54098 1239 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-201ENST00000334136 ERVK-9P63128 1117 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 ERVK-24P63145 666 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 ORC2Q13416 577 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-201ENST00000334136 KIAA0753Q2KHM9 967 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 CCDC91Q7Z6B0 441 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 NELFBQ8WX92 580 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 ANKRD7Q92527 254 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 SELENOSQ9BQE4 189 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 AFG3L2Q9Y4W6 797 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 TACC3Q9Y6A5 838 aa12.93□□□□□ -0.34
HDAC6-201ENST00000334136 TNS1Q9HBL0 1735 aaKnown RBP12.92□□□□□ -0.34
HDAC6-201ENST00000334136 PHLPP2Q6ZVD8 1323 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 M0QZ92 97 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 AP5Z1O43299 807 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 EZRP15311 586 aaKnown RBP12.92□□□□□ -0.34
HDAC6-201ENST00000334136 TUBB2AQ13885 445 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 PKN1Q16512 942 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 CNNM4Q6P4Q7 775 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 SECISBP2LQ93073 1101 aaKnown RBP12.92□□□□□ -0.34
HDAC6-201ENST00000334136 TUBB2BQ9BVA1 445 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms