RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ADAT2Q7Z6V5 191 aaKnown RBP12.92□□□□□ -0.34
LIMK2-202ENST00000333611 MAPKAPK5Q8IW41 473 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 FAM114A1Q8IWE2 563 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 BICD1Q96G01 975 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 CALML4Q96GE6 196 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 GPR101Q96P66 508 aaPredicted RBP12.92□□□□□ -0.34
LIMK2-202ENST00000333611 DUSP9Q99956 384 aaKnown RBP12.92□□□□□ -0.34
LIMK2-202ENST00000333611 GOLPH3Q9H4A6 298 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 THAP9Q9H5L6 903 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 CORO1CQ9ULV4 474 aaPredicted RBP12.92□□□□□ -0.34
LIMK2-202ENST00000333611 AKAP11Q9UKA4 1901 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 PDS5AQ29RF7 1337 aaKnown RBP12.92□□□□□ -0.34
LIMK2-202ENST00000333611 HMGB1P1B2RPK0 211 aaPredicted RBP12.92□□□□□ -0.34
LIMK2-202ENST00000333611 CCNE1P24864 410 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 IL6STP40189 918 aaPredicted RBP12.92□□□□□ -0.34
LIMK2-202ENST00000333611 SERPINB4P48594 390 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 DRP2Q13474 957 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 PRPF4BQ13523 1007 aaKnown RBP12.92□□□□□ -0.34
LIMK2-202ENST00000333611 CHADLQ6NUI6 762 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 MFN1Q8IWA4 741 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 MAB21L3Q8N8X9 362 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 ANKRD42Q8N9B4 389 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 GORASP1Q9BQQ3 440 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 SNX12Q9UMY4 172 aa12.92□□□□□ -0.34
LIMK2-202ENST00000333611 ADAMTS2O95450 1211 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 MYH10P35580 1976 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 SLC1A4P43007 532 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 RAPGEF1Q13905 1077 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 PAPD7Q5XG87 772 aaKnown RBP12.91□□□□□ -0.34
LIMK2-202ENST00000333611 USP17L2Q6R6M4 530 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 YTHDF3Q7Z739 585 aaKnown RBP12.91□□□□□ -0.34
LIMK2-202ENST00000333611 TGFBRAP1Q8WUH2 860 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 FAM114A2Q9NRY5 505 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 CCDC87Q9NVE4 849 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 BZW2Q9Y6E2 419 aaKnown RBP12.91□□□□□ -0.34
LIMK2-202ENST00000333611 SPEF2Q9C093 1822 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 TJP1Q07157 1748 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 CAMTA1Q9Y6Y1 1673 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 KCPQ6ZWJ8 1503 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 DCDC2CA8MYV0 355 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 RNF8O76064 485 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 EHHADHQ08426 723 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 TMED1Q13445 227 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 RNF10Q8N5U6 811 aaKnown RBP12.91□□□□□ -0.34
LIMK2-202ENST00000333611 CNBD1Q8NA66 436 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 LRRC15Q8TF66 581 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 TAF4BQ92750 862 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
LIMK2-202ENST00000333611 ABCF3Q9NUQ8 709 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 TMEM260Q9NX78 707 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 ARHGAP20Q9P2F6 1191 aa12.91□□□□□ -0.34
LIMK2-202ENST00000333611 SMCO2A6NFE2 343 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 TRAF5O00463 557 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 UBOX5O94941 541 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 MMEP08473 750 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 OR52Z1P0C646 297 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 ETS2P15036 469 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 MAGEA10P43363 369 aaPredicted RBP12.9□□□□□ -0.34
LIMK2-202ENST00000333611 TRAPPC10P48553 1259 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 EAPPQ56P03 285 aaPredicted RBP12.9□□□□□ -0.34
LIMK2-202ENST00000333611 RETREG2Q8NC44 543 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 FAM84BQ96KN1 310 aaPredicted RBP12.9□□□□□ -0.34
LIMK2-202ENST00000333611 TRIM9Q9C026 710 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 INTUQ9ULD6 942 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 PCDHA6Q9UN73 950 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 PCDHA8Q9Y5H6 950 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 USP54Q70EL1 1684 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 ANKRD33BA6NCL7 494 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 POTEMA6NI47 508 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 TMEM110-MUSTN1A8MSY1 372 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 KLRF2D3W0D1 207 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 TNNI2P48788 182 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 TUBP50607 506 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 TMEM62Q0P6H9 643 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 HAUS3Q68CZ6 603 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 MIGA2Q7L4E1 593 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 ZC3H18Q86VM9 953 aaKnown RBP12.9□□□□□ -0.34
LIMK2-202ENST00000333611 GIMAP8Q8ND71 665 aaPredicted RBP12.9□□□□□ -0.34
LIMK2-202ENST00000333611 GLIS3Q8NEA6 775 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 ZNF507Q8TCN5 953 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 NDST4Q9H3R1 872 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 PNMA2Q9UL42 364 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 ATP8A1Q9Y2Q0 1164 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 HYOU1Q9Y4L1 999 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 MYH7P12883 1935 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 FRMPD2Q68DX3 1309 aaPredicted RBP12.9□□□□□ -0.34
LIMK2-202ENST00000333611 A0A1W2PQC6 194 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 MAP3K13O43283 966 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 PPP2R2AP63151 447 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 HOOK3Q86VS8 718 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 ZNF384Q8TF68 577 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 RBM41Q96IZ5 413 aaKnown RBP12.9□□□□□ -0.34
LIMK2-202ENST00000333611 AP1M1Q9BXS5 423 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
LIMK2-202ENST00000333611 KCNK9Q9NPC2 374 aa12.9□□□□□ -0.34
LIMK2-202ENST00000333611 SEC63Q9UGP8 760 aaKnown RBP12.9□□□□□ -0.34
LIMK2-202ENST00000333611 KLRC4O43908 158 aa12.89□□□□□ -0.35
LIMK2-202ENST00000333611 HIBADHP31937 336 aaKnown RBP12.89□□□□□ -0.35
LIMK2-202ENST00000333611 ARL6IP4Q66PJ3 421 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms