RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 MAST2Q6P0Q8 1798 aa25.84■■□□□ 1.73
TSKU-201ENST00000333090 NPHP3-ACAD11A0A0J9YXS1 232 aa25.84■■□□□ 1.73
TSKU-201ENST00000333090 PGRMC1O00264 195 aaKnown RBP25.84■■□□□ 1.73
TSKU-201ENST00000333090 CES2O00748 559 aa25.84■■□□□ 1.73
TSKU-201ENST00000333090 RUFY4Q6ZNE9 571 aa25.84■■□□□ 1.73
TSKU-201ENST00000333090 EIF1ADQ8N9N8 165 aaKnown RBP25.84■■□□□ 1.73
TSKU-201ENST00000333090 CCDC114Q96M63 670 aa25.84■■□□□ 1.73
TSKU-201ENST00000333090 SETDB2Q96T68 719 aa25.84■■□□□ 1.73
TSKU-201ENST00000333090 NOC2LQ9Y3T9 749 aaKnown RBP25.84■■□□□ 1.73
TSKU-201ENST00000333090 E9PMD0 336 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 UBE2SQ16763 222 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 ACTRT1Q8TDG2 376 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 ZHX3Q9H4I2 956 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 CXorf56Q9H5V9 222 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 KRIT1O00522 736 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 GSTO1P78417 241 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 SEPT2Q15019 361 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 QPCTQ16769 361 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 SLC10A5Q5PT55 438 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 METTL13Q8N6R0 699 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 RIOX1Q9H6W3 641 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 AMACRQ9UHK6 382 aa25.83■■□□□ 1.73
TSKU-201ENST00000333090 DDX25Q9UHL0 483 aaKnown RBP25.83■■□□□ 1.73
TSKU-201ENST00000333090 MYH4Q9Y623 1939 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 GOLGA6L7A0A1B0GV03 622 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 TRAPPC3O43617 180 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 SMARCA1P28370 1054 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 BIRC3Q13489 604 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 C16orf86Q6ZW13 317 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 CCDC65Q8IXS2 484 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 SCFD1Q8WVM8 642 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 SLC40A1Q9NP59 571 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 NOVA2Q9UNW9 492 aaKnown RBP25.82■■□□□ 1.72
TSKU-201ENST00000333090 DAPK3O43293 454 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 SLC9A1P19634 815 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 CDR1P51861 262 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 MARSP56192 900 aaKnown RBP25.82■■□□□ 1.72
TSKU-201ENST00000333090 PLCB4Q15147 1175 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 LRRC57Q8N9N7 239 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 HAS1Q92839 578 aa25.82■■□□□ 1.72
TSKU-201ENST00000333090 CHUKO15111 745 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 RASSF9O75901 435 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 ITGA4P13612 1032 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 RDXP35241 583 aaKnown RBP25.81■■□□□ 1.72
TSKU-201ENST00000333090 PPP4CP60510 307 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 IFI16Q16666 785 aaKnown RBP25.81■■□□□ 1.72
TSKU-201ENST00000333090 IRF2BP2Q7Z5L9 587 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 ZKSCAN4Q969J2 545 aaPredicted RBP25.81■■□□□ 1.72
TSKU-201ENST00000333090 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.81■■□□□ 1.726e-7■■□□□ 13.2
TSKU-201ENST00000333090 EMILIN3Q9NT22 766 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 ANKIB1Q9P2G1 1089 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 CNOT8Q9UFF9 292 aaKnown RBP25.81■■□□□ 1.72
TSKU-201ENST00000333090 NAGPAQ9UK23 515 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 KIAA1024Q9UPX6 916 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 BTNL10A8MVZ5 291 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 PPP2R2AP63151 447 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 ALKBH5Q6P6C2 394 aaKnown RBP25.81■■□□□ 1.72
TSKU-201ENST00000333090 KCTD10Q9H3F6 313 aa25.81■■□□□ 1.72
TSKU-201ENST00000333090 PDHBP11177 359 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 SPRED3Q2MJR0 410 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 NGLY1Q96IV0 654 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 CALR3Q96L12 384 aaKnown RBP25.8■■□□□ 1.72
TSKU-201ENST00000333090 OSBPL7Q9BZF2 842 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 PCDHA12Q9UN75 941 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 PCDHA2Q9Y5H9 948 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 DCDC2CA8MYV0 355 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 CETN3O15182 167 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 NR2F2P24468 414 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 BTDP43251 543 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 DRP2Q13474 957 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 C10orf76Q5T2E6 689 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 PEX26Q7Z412 305 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 GPBP1Q86WP2 473 aa25.8■■□□□ 1.72
TSKU-201ENST00000333090 A1CFQ9NQ94 594 aaKnown RBP25.8■■□□□ 1.72
TSKU-201ENST00000333090 UCHL3P15374 230 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 HDAC9Q9UKV0 1011 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 hCG_1984214I3L0E3 225 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 MAGOHP61326 146 aaKnown RBP25.79■■□□□ 1.72
TSKU-201ENST00000333090 LRRC47Q8N1G4 583 aaKnown RBP25.79■■□□□ 1.72
TSKU-201ENST00000333090 ZNF713Q8N859 430 aaPredicted RBP25.79■■□□□ 1.72
TSKU-201ENST00000333090 TPCN2Q8NHX9 752 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 MAGOHBQ96A72 148 aaKnown RBP25.79■■□□□ 1.72
TSKU-201ENST00000333090 KRT18P05783 430 aaKnown RBP25.79■■□□□ 1.72
TSKU-201ENST00000333090 PLA2G4BP0C869 781 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 MTMR3Q13615 1198 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 NFIXQ14938 502 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 KRT71Q3SY84 523 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 BARGINQ6ZT62 677 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 TEX11Q8IYF3 940 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 SEC16BQ96JE7 1060 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 RTFDC1Q9BY42 306 aaPredicted RBP25.79■■□□□ 1.72
TSKU-201ENST00000333090 GPCPD1Q9NPB8 672 aa25.79■■□□□ 1.72
TSKU-201ENST00000333090 TTI1O43156 1089 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 ATP2C2O75185 946 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 LDHCP07864 332 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 EIF6P56537 245 aaKnown RBP25.78■■□□□ 1.72
TSKU-201ENST00000333090 RAPGEF5Q92565 580 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 CELF4Q9BZC1 486 aaKnown RBP25.78■■□□□ 1.72
TSKU-201ENST00000333090 NT5C3AQ9H0P0 336 aa25.78■■□□□ 1.72
TSKU-201ENST00000333090 DPH5Q9H2P9 285 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms