RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 SPATA1Q5VX52 437 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ALS2CLQ60I27 953 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 LSM14BQ9BX40 385 aaKnown RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 STX18Q9P2W9 335 aaKnown RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 G3BP2Q9UN86 482 aaKnown RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 F8W031 263 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 H0YIN7 160 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 STX7O15400 261 aaKnown RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 CUL1Q13616 776 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 DDHD1Q8NEL9 900 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ZSCAN32Q9NX65 697 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 PCDHA12Q9UN75 941 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 PDE5AO76074 875 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 MAP4P27816 1152 aaKnown RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 RAD51AP2Q09MP3 1159 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 PBKQ96KB5 322 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 CLEC4MQ9H2X3 399 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ZBTB21Q9ULJ3 1066 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 TCHHQ07283 1943 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 CDC42BPGQ6DT37 1551 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 PREX2Q70Z35 1606 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 GNGT2O14610 69 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 APOL1O14791 398 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ADCY8P40145 1251 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 TFDP1Q14186 410 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ATP11CQ8NB49 1132 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 CD209Q9NNX6 404 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 DIS3Q9Y2L1 958 aaKnown RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ATP8B3O60423 1300 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 PFKFB2O60825 505 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 MLH1P40692 756 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ATG16L1Q676U5 607 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 CCDC103Q8IW40 242 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 BLIDQ8IZY5 108 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 PHACTR3Q96KR7 559 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 LZTS1Q9Y250 596 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 USP19O94966 1318 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 PPARGP37231 505 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ASZ1Q8WWH4 475 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 MRPL47Q9HD33 250 aaKnown RBP10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ABCC4O15439 1325 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 PPP6R2O75170 966 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 PGM3O95394 542 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 IGBP1P78318 339 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 GPR108Q9NPR9 543 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ATAD3AQ9NVI7 634 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 CALML6Q8TD86 181 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 GPCPD1Q9NPB8 672 aa10.43□□□□□ -0.74
COL12A1-201ENST00000322507 ADCY9O60503 1353 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 DPP8Q6V1X1 898 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-201ENST00000322507 LRRC39Q96DD0 335 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 A8MXQ7 604 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 FAM160B1Q5W0V3 765 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 E7EWF7 191 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 CIAO1O76071 339 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 GSTA1P08263 222 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 ORC2Q13416 577 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-201ENST00000322507 FRA10AC1Q70Z53 315 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 LRRC8AQ8IWT6 810 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 OTULINQ96BN8 352 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 BAZ2BQ9UIF8 2168 aaKnown RBP10.42□□□□□ -0.74
COL12A1-201ENST00000322507 MTX1Q13505 466 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 RNF26Q9BY78 433 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-201ENST00000322507 FKBP14Q9NWM8 211 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 OLFML2BQ68BL8 750 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 TYW1BQ6NUM6 668 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 TBC1D1Q86TI0 1168 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-201ENST00000322507 SERPINB13Q9UIV8 391 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 ANAPC5Q9UJX4 755 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 PTK2Q05397 1052 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 TSTA3Q13630 321 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-201ENST00000322507 TTLL11Q8NHH1 800 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 THOC1Q96FV9 657 aaKnown RBP10.42□□□□□ -0.74
COL12A1-201ENST00000322507 BLOC1S6Q9UL45 172 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 ADCY10Q96PN6 1610 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 RSPH10B2B2RC85 870 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 GNPATO15228 680 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 RSPH10BP0C881 870 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 ATP2B4P23634 1241 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 RCN1Q15293 331 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 TRIM69Q86WT6 500 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 DTX3LQ8TDB6 740 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 ASCC2Q9H1I8 757 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-201ENST00000322507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.42□□□□□ -0.74
COL12A1-201ENST00000322507 TNNQ9UQP3 1299 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 TMA7Q9Y2S6 64 aaKnown RBP10.42□□□□□ -0.74
COL12A1-201ENST00000322507 YEATS2Q9ULM3 1422 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 FOXP2O15409 715 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 PDE9AO76083 593 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 PDHA1P08559 390 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 CD19P15391 556 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 LRRC8EQ6NSJ5 796 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 MTBPQ96DY7 904 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 RPS6KC1Q96S38 1066 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 TMEM206Q9H813 350 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 OATP04181 439 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 MFAP3P55082 362 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 SLC10A5Q5PT55 438 aa10.42□□□□□ -0.74
COL12A1-201ENST00000322507 CHST3Q7LGC8 479 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms