RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 SCFD1Q8WVM8 642 aa22.81■■□□□ 1.24
CPNE7-202ENST00000319518 ZIM3Q96PE6 472 aa22.81■■□□□ 1.24
CPNE7-202ENST00000319518 SERPINA10Q9UK55 444 aa22.81■■□□□ 1.24
CPNE7-202ENST00000319518 ARFGEF1Q9Y6D6 1849 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 GOLGA8KD6RF30 607 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 MARSP56192 900 aaKnown RBP22.8■■□□□ 1.24
CPNE7-202ENST00000319518 FKBP1AP62942 108 aaKnown RBP22.8■■□□□ 1.24
CPNE7-202ENST00000319518 MRIQ9BWK5 157 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 CAPS2Q9BXY5 557 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 DHX36Q9H2U1 1008 aaKnown RBP22.8■■□□□ 1.24
CPNE7-202ENST00000319518 RABEP2Q9H5N1 569 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 PCDHA12Q9UN75 941 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 ARID5AQ03989 594 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 SLC18A3Q16572 532 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 TTC19Q6DKK2 380 aaPredicted RBP22.8■■□□□ 1.24
CPNE7-202ENST00000319518 CCDC17Q96LX7 622 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 CEP63Q96MT8 703 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 PCDHGC5Q9Y5F6 944 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 UTRNP46939 3433 aa22.8■■□□□ 1.24
CPNE7-202ENST00000319518 HOXA7P31268 230 aaPredicted RBP22.79■■□□□ 1.24
CPNE7-202ENST00000319518 HDLBPQ00341 1268 aaKnown RBP22.79■■□□□ 1.24
CPNE7-202ENST00000319518 RRP1BQ14684 758 aaKnown RBP22.79■■□□□ 1.24
CPNE7-202ENST00000319518 TRADDQ15628 312 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 GLE1Q53GS7 698 aaKnown RBP22.79■■□□□ 1.24
CPNE7-202ENST00000319518 DNAJC21Q5F1R6 531 aaKnown RBP22.79■■□□□ 1.24
CPNE7-202ENST00000319518 INPP4AQ96PE3 977 aaPredicted RBP22.79■■□□□ 1.24
CPNE7-202ENST00000319518 GANQ9H2C0 597 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 TSKSQ9UJT2 592 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 NFU1Q9UMS0 254 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 KIAA1024Q9UPX6 916 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 POTEB3A0JP26 581 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 POTECB2RU33 542 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 GPATCH4Q5T3I0 446 aaKnown RBP22.79■■□□□ 1.24
CPNE7-202ENST00000319518 MEI1Q5TIA1 1274 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 ALS2CLQ60I27 953 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 DPY19L2P1Q6NXN4 242 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 PPP1R18Q6NYC8 613 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 POTEBQ6S5H4 581 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 FAM133AQ8N9E0 248 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 ADAMTS1Q9UHI8 967 aa22.79■■□□□ 1.24
CPNE7-202ENST00000319518 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.79■■□□□ 1.241e-6■□□□□ 9.2
CPNE7-202ENST00000319518 ZBTB5O15062 677 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 RAD17O75943 681 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 KRT14P02533 472 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 CCT5P48643 541 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 SLFN13Q68D06 897 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 PACS2Q86VP3 889 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 ZC3H3Q8IXZ2 948 aaKnown RBP22.78■■□□□ 1.24
CPNE7-202ENST00000319518 CUL5Q93034 780 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 NUCKS1Q9H1E3 243 aaKnown RBP22.78■■□□□ 1.24
CPNE7-202ENST00000319518 EPB41L5Q9HCM4 733 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 ATF5Q9Y2D1 282 aaPredicted RBP22.78■■□□□ 1.24
CPNE7-202ENST00000319518 EIF3HO15372 352 aaKnown RBP eCLIP22.78■■□□□ 1.24
CPNE7-202ENST00000319518 HEXIM1O94992 359 aaKnown RBP22.78■■□□□ 1.24
CPNE7-202ENST00000319518 PLA2G4BP0C869 781 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 TAL1P17542 331 aaPredicted RBP22.78■■□□□ 1.24
CPNE7-202ENST00000319518 CYP11B2P19099 503 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 RAPGEF1Q13905 1077 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 ENOX2Q16206 610 aaKnown RBP22.78■■□□□ 1.24
CPNE7-202ENST00000319518 DEFB132Q7Z7B7 95 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 IQCKQ8N0W5 287 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 SH2D3CQ8N5H7 860 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 PIK3R5Q8WYR1 880 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 AIPL1Q9NZN9 384 aa22.78■■□□□ 1.24
CPNE7-202ENST00000319518 CLRN2A0PK11 232 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 GRID2IPA4D2P6 1211 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 OPA1O60313 960 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 GNGT1P63211 74 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 GUCY2DQ02846 1103 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 ICA1Q05084 483 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 NNTQ13423 1086 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 ARSHQ5FYA8 562 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 TATDN1Q6P1N9 297 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 RNF14Q9UBS8 474 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 ATAD5Q96QE3 1844 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 ZNF233A6NK53 670 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 TCP10L2B9ZVM9 353 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 USP17L15C9J2P7 530 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 USP17L13C9JLJ4 530 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 USP17L11C9JVI0 530 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 USP17L18D6R9N7 530 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 USP17L22D6RA61 530 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 USP17L17D6RBQ6 530 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 USP17L19D6RCP7 530 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 USP17L20D6RJB6 530 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 CASP5P51878 434 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 USP17L24Q0WX57 530 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 KIAA0753Q2KHM9 967 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 QRICH1Q2TAL8 776 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 USP17L6PQ6QN14 398 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 GPBP1Q86WP2 473 aa22.77■■□□□ 1.24
CPNE7-202ENST00000319518 ZNF277Q9NRM2 450 aaPredicted RBP22.77■■□□□ 1.24
CPNE7-202ENST00000319518 HSF2BPO75031 334 aa22.76■■□□□ 1.23
CPNE7-202ENST00000319518 ACTN1P12814 892 aa22.76■■□□□ 1.23
CPNE7-202ENST00000319518 STAT3P40763 770 aa22.76■■□□□ 1.23
CPNE7-202ENST00000319518 RNASE9P60153 205 aaKnown RBP22.76■■□□□ 1.23
CPNE7-202ENST00000319518 HERC4Q5GLZ8 1057 aaPredicted RBP22.76■■□□□ 1.23
CPNE7-202ENST00000319518 KRT12Q99456 494 aa22.76■■□□□ 1.23
CPNE7-202ENST00000319518 PSTPIP2Q9H939 334 aa22.76■■□□□ 1.23
CPNE7-202ENST00000319518 EMILIN3Q9NT22 766 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms