RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 NR2E1Q9Y466 385 aa15.34■□□□□ 0.05
SYCN-201ENST00000318438 ORC4O43929 436 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 FGRP09769 529 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 GNAT1P11488 350 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 MYCLP12524 364 aaPredicted RBP15.33■□□□□ 0.04
SYCN-201ENST00000318438 SDSP20132 328 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 PDE4AP27815 886 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 ARHGAP4P98171 946 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 VPS53Q5VIR6 699 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 RUFY4Q6ZNE9 571 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 TRIM50Q86XT4 487 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 GPKOWQ92917 476 aaPredicted RBP eCLIP15.33■□□□□ 0.04
SYCN-201ENST00000318438 ZFP91Q96JP5 570 aaPredicted RBP15.33■□□□□ 0.04
SYCN-201ENST00000318438 DLL3Q9NYJ7 618 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 CHD8Q9HCK8 2581 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 ABCB11O95342 1321 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 ZMYM6O95789 1325 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 CCDC171Q6TFL3 1326 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 SPTBN2O15020 2390 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 MYH7BA7E2Y1 1941 aa15.33■□□□□ 0.04
SYCN-201ENST00000318438 MFAP1P55081 439 aaKnown RBP15.32■□□□□ 0.04
SYCN-201ENST00000318438 ERVFC1P60507 584 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 ADAM17P78536 824 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 MGAT3Q09327 533 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 KCNC3Q14003 757 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 ALX1Q15699 326 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 CDC37Q16543 378 aaPredicted RBP15.32■□□□□ 0.04
SYCN-201ENST00000318438 ZNF589Q86UQ0 364 aaPredicted RBP15.32■□□□□ 0.04
SYCN-201ENST00000318438 CCDC105Q8IYK2 499 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 CRIPAKQ8N1N5 446 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 LMBR1Q8WVP7 490 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 CDCA3Q99618 268 aaPredicted RBP15.32■□□□□ 0.04
SYCN-201ENST00000318438 HINFPQ9BQA5 517 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 POMKQ9H5K3 350 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 MLXIPQ9HAP2 919 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 TOMM22Q9NS69 142 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 R4GN57 208 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 TTC3P53804 2025 aa15.32■□□□□ 0.04
SYCN-201ENST00000318438 PLXNA4Q9HCM2 1894 aa15.31■□□□□ 0.04
SYCN-201ENST00000318438 HIP1O00291 1037 aa15.31■□□□□ 0.04
SYCN-201ENST00000318438 SRGAP2BP0DMP2 458 aa15.31■□□□□ 0.04
SYCN-201ENST00000318438 SNHG28P0DPA3 235 aa15.31■□□□□ 0.04
SYCN-201ENST00000318438 RRP12Q5JTH9 1297 aaKnown RBP15.31■□□□□ 0.04
SYCN-201ENST00000318438 FBXO47Q5MNV8 452 aa15.31■□□□□ 0.04
SYCN-201ENST00000318438 TMEM184AQ6ZMB5 413 aa15.31■□□□□ 0.04
SYCN-201ENST00000318438 RTN4RL1Q86UN2 441 aaPredicted RBP15.31■□□□□ 0.04
SYCN-201ENST00000318438 MCF2L2Q86YR7 1114 aa15.31■□□□□ 0.04
SYCN-201ENST00000318438 NPAS4Q8IUM7 802 aa15.31■□□□□ 0.04
SYCN-201ENST00000318438 FSD2A1L4K1 749 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 CFBP00751 764 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 HSPD1P10809 573 aaKnown RBP15.3■□□□□ 0.04
SYCN-201ENST00000318438 NPR3P17342 541 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 AOC1P19801 751 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 IBSPP21815 317 aaPredicted RBP15.3■□□□□ 0.04
SYCN-201ENST00000318438 CD52P31358 61 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 MAP1BP46821 2468 aaKnown RBP15.3■□□□□ 0.04
SYCN-201ENST00000318438 APOBRQ0VD83 1088 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 TTC22Q5TAA0 569 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 KCNV1Q6PIU1 500 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 DTWD2Q8NBA8 298 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 IL31RAQ8NI17 732 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 CYP2W1Q8TAV3 490 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 PDCD2LQ9BRP1 358 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 MAF1Q9H063 256 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 AGO3Q9H9G7 860 aaKnown RBP15.3■□□□□ 0.04
SYCN-201ENST00000318438 DIAPH3Q9NSV4 1193 aa15.3■□□□□ 0.04
SYCN-201ENST00000318438 USP24Q9UPU5 2620 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 NOP56O00567 594 aaKnown RBP15.29■□□□□ 0.04
SYCN-201ENST00000318438 FGAP02671 866 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 GSPT1P15170 499 aaKnown RBP15.29■□□□□ 0.04
SYCN-201ENST00000318438 UBE3AQ05086 875 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 ST3GAL2Q16842 350 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 RSPO4Q2I0M5 234 aaPredicted RBP15.29■□□□□ 0.04
SYCN-201ENST00000318438 PLPP4Q5VZY2 271 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 TSHZ1Q6ZSZ6 1077 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 DCLK2Q8N568 766 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 TCP11L1Q9NUJ3 509 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 HCSTQ9UBK5 93 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 LIMD1Q9UGP4 676 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 TELO2Q9Y4R8 837 aa15.29■□□□□ 0.04
SYCN-201ENST00000318438 OTOGLQ3ZCN5 2332 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 FSCN2O14926 492 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 FGF18O76093 207 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 WEE2P0C1S8 567 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 SPOUT1Q5T280 376 aaKnown RBP15.28■□□□□ 0.04
SYCN-201ENST00000318438 UTP14CQ5TAP6 766 aaKnown RBP15.28■□□□□ 0.04
SYCN-201ENST00000318438 CWC27Q6UX04 472 aaKnown RBP15.28■□□□□ 0.04
SYCN-201ENST00000318438 ADGRF4Q8IZF3 695 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 USP26Q9BXU7 913 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 SEMA4AQ9H3S1 761 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 TMEM260Q9NX78 707 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
SYCN-201ENST00000318438 PCDHB12Q9Y5F1 795 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 CDY2AQ9Y6F7 541 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 MYO10Q9HD67 2058 aa15.28■□□□□ 0.04
SYCN-201ENST00000318438 HIDE1A8MVS5 230 aa15.27■□□□□ 0.04
SYCN-201ENST00000318438 OPLAHO14841 1288 aa15.27■□□□□ 0.04
SYCN-201ENST00000318438 STAG3L1P0CL83 205 aa15.27■□□□□ 0.04
SYCN-201ENST00000318438 TGFB3P10600 412 aa15.27■□□□□ 0.04
SYCN-201ENST00000318438 HOXB8P17481 243 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms