RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PHRF1Q9P1Y6 1649 aaKnown RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 HNRNPCL1O60812 293 aaKnown RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 FXR2P51116 673 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 DNA2P51530 1060 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 NAPAP54920 295 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 NKX2-3Q8TAU0 364 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 MORC4Q8TE76 937 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 HINFPQ9BQA5 517 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 ERP44Q9BS26 406 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 LSM14BQ9BX40 385 aaKnown RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 DDX47Q9H0S4 455 aaKnown RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 VCXQ9H320 206 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 TXLNGQ9NUQ3 528 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 ARMCX3Q9UH62 379 aaPredicted RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 PCDHA6Q9UN73 950 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 ARL2BPQ9Y2Y0 163 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 NOC2LQ9Y3T9 749 aaKnown RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 USP15Q9Y4E8 981 aaPredicted RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 PCDHA8Q9Y5H6 950 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 A0A087X0T9 212 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 F8W031 263 aaPredicted RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 RASGRF2O14827 1237 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 EPHB6O15197 1021 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 LDHCP07864 332 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 FAM228BP0C875 321 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 PDHBP11177 359 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 IL17AQ16552 155 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 LETM2Q2VYF4 491 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 HELBQ8NG08 1087 aaPredicted RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 SHISA4Q96DD7 197 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 SMARCAL1Q9NZC9 954 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 NAGPAQ9UK23 515 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 HDAC9Q9UKV0 1011 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 MTUS1Q9ULD2 1270 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 KDM3AQ9Y4C1 1321 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 MARCH6O60337 910 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 VIMP08670 466 aaKnown RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 NQO1P15559 274 aaKnown RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 TMOD1P28289 359 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 UAP1Q16222 522 aaPredicted RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 PDCD2Q16342 344 aaPredicted RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 MFSD5Q6N075 450 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 TOM1L2Q6ZVM7 507 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 TRMT10CQ7L0Y3 403 aaKnown RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 LRRC57Q8N9N7 239 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 SPDL1Q96EA4 605 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 ZNF317Q96PQ6 595 aaPredicted RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 TMEM60Q9H2L4 133 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 USP40Q9NVE5 1235 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 ZNF804BA4D1E1 1349 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 KLHL33A6NCF5 533 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 ZSCAN5CA6NGD5 496 aaPredicted RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 GGPS1O95749 300 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 FCER1AP12319 257 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 PAX7P23759 505 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 MRPS25P82663 173 aaKnown RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 ZCWPW2Q504Y3 356 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 CMPK2Q5EBM0 449 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 BICDL1Q6ZP65 573 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 CTNNBL1Q8WYA6 563 aaPredicted RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 TRPC6Q9Y210 931 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 TACC3Q9Y6A5 838 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 TLDC2A0PJX2 215 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 WNT7AO00755 349 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 DAPK3O43293 454 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SNX3O60493 162 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 LMNB1P20700 586 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 CCNG1P51959 295 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 DR1Q01658 176 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 TRAF1Q13077 416 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 RHOT2Q8IXI1 618 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ZNF34Q8IZ26 560 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 KIAA0895Q8NCT3 520 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SELENOSQ9BQE4 189 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 NKIRAS1Q9NYS0 192 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ZFATQ9P243 1243 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SPATA31A3Q5VYP0 1347 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ADAMTS7Q9UKP4 1686 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 FMN2Q9NZ56 1722 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 GTPBP10A4D1E9 387 aaKnown RBP5.19□□□□□ -1.58
PTPN13-201ENST00000316707 POTEFA5A3E0 1075 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 TMEM253P0C7T8 217 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 POTEIP0CG38 1075 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 POTEJP0CG39 1038 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 NEFHP12036 1026 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ECHS1P30084 290 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 KIAA1755Q5JYT7 1200 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 POTEEQ6S8J3 1075 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SLFN11Q7Z7L1 901 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 DAAM2Q86T65 1068 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 AGGF1Q8N302 714 aaeCLIP5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SNX29Q8TEQ0 813 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 RFFLQ8WZ73 363 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 SALL4Q9UJQ4 1053 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ATP8A1Q9Y2Q0 1164 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 FLT1P17948 1338 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 LRRD1A4D1F6 860 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ANP32DO95626 131 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 RARGP13631 454 aa5.19□□□□□ -1.58
PTPN13-201ENST00000316707 ATF3P18847 181 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms