RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 TMTC2Q8N394 836 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 GMLQ99445 158 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 USP40Q9NVE5 1235 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 KCNH3Q9ULD8 1083 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 PLAAQ9Y263 795 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 CDC25AP30304 524 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 UBXN1Q04323 297 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 TOB2Q14106 344 aaPredicted RBP12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 RNF220Q5VTB9 566 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 NUGGCQ68CJ6 796 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 ZDHHC15Q96MV8 337 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 MRIQ9BWK5 157 aa12.74□□□□□ -0.37
LDLRAD3-201ENST00000315571 MFAP3LO75121 409 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 FGAP02671 866 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 RASGRP2Q7LDG7 609 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 NANOGNBQ7Z5D8 188 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 KLHL7Q8IXQ5 586 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 UNC45AQ9H3U1 944 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 PREBQ9HCU5 417 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 MAST2Q6P0Q8 1798 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 ATXN2Q99700 1313 aaKnown RBP12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 CCT8L1PA6NM43 557 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 GSG1L2A8MUP6 293 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 NECTIN1Q15223 517 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 TEX9Q8N6V9 391 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 ATL2Q8NHH9 583 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 TGFBRAP1Q8WUH2 860 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 RPS6KC1Q96S38 1066 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 SMARCAL1Q9NZC9 954 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 TMOD2Q9NZR1 351 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 MGRN1O60291 552 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 HEXIM1O94992 359 aaKnown RBP12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 TRIM21P19474 475 aaKnown RBP12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 CMA1P23946 247 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 HAND2P61296 217 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 MAP7Q14244 749 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 RBM26Q5T8P6 1007 aaKnown RBP12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 GPC2Q8N158 579 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 C17orf50Q8WW18 174 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 TAB2Q9NYJ8 693 aa12.73□□□□□ -0.37
LDLRAD3-201ENST00000315571 ZNF213O14771 459 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 XRCC4Q13426 336 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 PICALMQ13492 652 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 OR2W6PQ8NHA6 318 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 EPB41L4AQ9HCS5 686 aaPredicted RBP12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 ATP8A2Q9NTI2 1148 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 APOBEC3HQ6NTF7 200 aaKnown RBP12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 DPY19L2Q6NUT2 758 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 ZC3H18Q86VM9 953 aaKnown RBP12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 MAPKAPK5Q8IW41 473 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 GBP7Q8N8V2 638 aaPredicted RBP12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 MLKLQ8NB16 471 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 HIC2Q96JB3 615 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 CCDC88AQ3V6T2 1871 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 CFAP73A6NFT4 308 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 MINDY4BA8MYZ0 360 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 H7C1D1 291 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 IGF2BP3O00425 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 NDNQ99608 321 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 UBE2OQ9C0C9 1292 aaKnown RBP12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 CNOT7Q9UIV1 285 aaKnown RBP12.72□□□□□ -0.37
LDLRAD3-201ENST00000315571 FOXP2O15409 715 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 NDUFA10O95299 355 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 ALX1Q15699 326 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 IFI16Q16666 785 aaKnown RBP12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 QPCTQ16769 361 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 SPRED3Q2MJR0 410 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 CDC42EP5Q6NZY7 148 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 P3H4Q92791 437 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 ECT2Q9H8V3 914 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 POLR2DO15514 142 aaKnown RBP12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 SEPT2Q15019 361 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 CRELD2Q6UXH1 353 aaPredicted RBP12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 HAUS1Q96CS2 278 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 TRIM7Q9C029 511 aa12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 DCP1AQ9NPI6 582 aaPredicted RBP12.71□□□□□ -0.37
LDLRAD3-201ENST00000315571 CAPN15O75808 1086 aa12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 RHBDL3P58872 404 aa12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 CYP27A1Q02318 531 aa12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 PDE4BQ07343 736 aa12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 PPFIBP2Q8ND30 876 aa12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 MGARPQ8TDB4 240 aa12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 TDRD3Q9H7E2 651 aaKnown RBP12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 EBF2Q9HAK2 575 aa12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 MYOZ2Q9NPC6 264 aa12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 MAGEC2Q9UBF1 373 aaPredicted RBP12.71□□□□□ -0.38
LDLRAD3-201ENST00000315571 SPDYE2BA6NHP3 402 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 AKR1B10O60218 316 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 DDNO94850 711 aaPredicted RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 CYP21A2P08686 494 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 SPDYE6P0CI01 402 aa12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 MAGOHP61326 146 aaKnown RBP12.7□□□□□ -0.38
LDLRAD3-201ENST00000315571 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms