RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 SGPL1O95470 568 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 CST5P28325 142 aaPredicted RBP17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 STAT5BP51692 787 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 CTTNQ14247 550 aaKnown RBP17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 KCNA10Q16322 511 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 AXDND1Q5T1B0 1012 aaPredicted RBP17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 PDXDC2PQ6P474 469 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 CABP7Q86V35 215 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 TRIM50Q86XT4 487 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 CCDC60Q8IWA6 550 aaPredicted RBP17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 TPH2Q8IWU9 490 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 ZNF579Q8NAF0 562 aaKnown RBP17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 KLHDC9Q8NEP7 349 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 NEK9Q8TD19 979 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 SYMPKQ92797 1274 aaKnown RBP17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 CDK5RAP3Q96JB5 506 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 SMARCAD1Q9H4L7 1026 aa17.63■□□□□ 0.41
TUBA3E-201ENST00000312988 GOLGA6L22H0YM25 854 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 LGR5O75473 907 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 P4HBP07237 508 aaKnown RBP17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 QARSP47897 775 aaKnown RBP17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 PSMC5P62195 406 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 NKX3-2P78367 333 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 CLEC17AQ6ZS10 378 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 TRMT1LQ7Z2T5 733 aaKnown RBP17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 EPSTI1Q96J88 318 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 PCYT2Q99447 389 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 LXNQ9BS40 222 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 FAM13BQ9NYF5 915 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 ZNF215Q9UL58 517 aaPredicted RBP17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 OGDHLQ9ULD0 1010 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 EMSYQ7Z589 1322 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 DKC1O60832 514 aaKnown RBP eCLIP17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 MED24O75448 989 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 ASGR1P07306 291 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 HOXD8P13378 290 aaPredicted RBP17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 MARK3P27448 753 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 UGCGQ16739 394 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 ADALQ6DHV7 355 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 SHC4Q6S5L8 630 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 CXCL17Q6UXB2 119 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 VTI1AQ96AJ9 217 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 CALML4Q96GE6 196 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 POLR3CQ9BUI4 534 aaPredicted RBP17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 TUFT1Q9NNX1 390 aa17.62■□□□□ 0.41
TUBA3E-201ENST00000312988 KDM3AQ9Y4C1 1321 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 IGKV6D-21A0A0A0MT36 114 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 POTEB3A0JP26 581 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 DNM1LO00429 736 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 PRPF40AO75400 957 aaKnown RBP17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 SLITRK3O94933 977 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 RPA1P27694 616 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 GJA8P48165 433 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 PURAQ00577 322 aaKnown RBP17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 POTEBQ6S5H4 581 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 USP49Q70CQ1 688 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 PLPPR4Q7Z2D5 763 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 CATSPER3Q86XQ3 398 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 TMEM87AQ8NBN3 555 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 PLIN2Q99541 437 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 HSD17B14Q9BPX1 270 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 TSEN34Q9BSV6 310 aaKnown RBP17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 MTG1Q9BT17 334 aaPredicted RBP17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 CRISPLD2Q9H0B8 497 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 ZSWIM4Q9H7M6 989 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 ERAP1Q9NZ08 941 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 CCDC39Q9UFE4 941 aa17.61■□□□□ 0.41
TUBA3E-201ENST00000312988 IGSF9BQ9UPX0 1349 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 H3BRB1 525 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 ACLYP53396 1101 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 PRKCEQ02156 737 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 KARSQ15046 597 aaKnown RBP17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 RESP18Q5W5W9 173 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 CCSAPQ6IQ19 270 aaPredicted RBP17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 FSIP1Q8NA03 581 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 AFAP1L1Q8TED9 768 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 C16orf70Q9BSU1 422 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 MMTAG2Q9BU76 263 aaKnown RBP17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 KATNAL1Q9BW62 490 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 CCSER1Q9C0I3 900 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 TUT1Q9H6E5 874 aaKnown RBP17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 KIAA1024Q9UPX6 916 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 TRPC6Q9Y210 931 aa17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 MAFBQ9Y5Q3 323 aaPredicted RBP17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
TUBA3E-201ENST00000312988 KIAA0100Q14667 2235 aaKnown RBP17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 A0A1W2PQ27 194 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 A0A1W2PQ64 194 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 A0A1W2PQD8 194 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 MOXD2PA6NHM9 499 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 F2P00734 622 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 SPATA31C1P0DKV0 1188 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 CMA1P23946 247 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 PSEN2P49810 448 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 SLC26A2P50443 739 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 MFSD10Q14728 455 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 POTEGQ6S5H5 508 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 MRPS27Q92552 414 aaKnown RBP17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 PANK2Q9BZ23 570 aa17.59■□□□□ 0.41
TUBA3E-201ENST00000312988 DDX19AQ9NUU7 478 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms