RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CCND2P30279 289 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 PLTPP55058 493 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 ZNF658Q5TYW1 1059 aaPredicted RBP16.61■□□□□ 0.25
HCFC1-201ENST00000310441 PLA2G4DQ86XP0 818 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 SYT2Q8N9I0 419 aaPredicted RBP16.61■□□□□ 0.25
HCFC1-201ENST00000310441 FSD1LQ9BXM9 530 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 SUGCTQ9HAC7 445 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 STRIP2Q9ULQ0 834 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 KIAA1024Q9UPX6 916 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 SEMA3EO15041 775 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 ME3Q16798 604 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 SAAL1Q96ER3 474 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 USP14P54578 494 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 SLFN12LQ6IEE8 588 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 CYP4F22Q6NT55 531 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 EFHBQ8N7U6 833 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 ITM2BQ9Y287 266 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 LAMC1P11047 1609 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
HCFC1-201ENST00000310441 AARSP49588 968 aaKnown RBP eCLIP16.61■□□□□ 0.25
HCFC1-201ENST00000310441 AKT3Q9Y243 479 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 NNTQ13423 1086 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 BRIP1Q9BX63 1249 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 SLC52A2Q9HAB3 445 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 HPCAL4Q9UM19 191 aa16.61■□□□□ 0.25
HCFC1-201ENST00000310441 ARHGAP31Q2M1Z3 1444 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 TCP10Q12799 353 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 MAPRE2Q15555 327 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 C17orf53Q8N3J3 647 aaPredicted RBP16.6■□□□□ 0.25
HCFC1-201ENST00000310441 RBM41Q96IZ5 413 aaKnown RBP16.6■□□□□ 0.25
HCFC1-201ENST00000310441 CCDC17Q96LX7 622 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 THAP9Q9H5L6 903 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 PSMA3P25788 255 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 MAPKAPK5Q8IW41 473 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 KLHL38Q2WGJ6 581 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 KIAA1841Q6NSI8 718 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 TTC8Q8TAM2 541 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 CROCC2H7BZ55 1655 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 PIK3R2O00459 728 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 TTLL1O95922 423 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 TTC19Q6DKK2 380 aaPredicted RBP16.6■□□□□ 0.25
HCFC1-201ENST00000310441 MYOM2P54296 1465 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 CFAP73A6NFT4 308 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 PYGMP11217 842 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 HLA-DPA1P20036 260 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 MAGEA9P43362 315 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 PSMD7P51665 324 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 SLC39A2Q9NP94 309 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 ZSCAN20P17040 1043 aaPredicted RBP16.6■□□□□ 0.25
HCFC1-201ENST00000310441 HSPA2P54652 639 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 EPHB1P54762 984 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 ICA1Q05084 483 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 CALN1Q9BXU9 219 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 PARVGQ9HBI0 331 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 MYH11P35749 1972 aa16.6■□□□□ 0.25
HCFC1-201ENST00000310441 ARL4CP56559 192 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 PHF21AQ96BD5 680 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 PRDM1O75626 825 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 DBNDD2Q9BQY9 259 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 PITPNM3Q9BZ71 974 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 MMEP08473 750 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 SLFN14P0C7P3 912 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 DPY19L2Q6NUT2 758 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 NDUFA8P51970 172 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 COPS2P61201 443 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 MYO1DO94832 1006 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 CPA1P15085 419 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 KIAA1755Q5JYT7 1200 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 CFAP36Q96G28 342 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 KMT5AQ9NQR1 393 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 TTC39CQ8N584 583 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 P2RX5Q93086 422 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 GJA10Q969M2 543 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.59■□□□□ 0.25
HCFC1-201ENST00000310441 DBNLQ9UJU6 430 aaKnown RBP16.59■□□□□ 0.25
HCFC1-201ENST00000310441 SYNJ2BP-COX16A0A087WUM0 186 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 HSPA1AP0DMV8 641 aaKnown RBP16.59■□□□□ 0.25
HCFC1-201ENST00000310441 HSPA1BP0DMV9 641 aaKnown RBP16.59■□□□□ 0.25
HCFC1-201ENST00000310441 IMPG1Q17R60 797 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 COX16Q9P0S2 106 aa16.59■□□□□ 0.25
HCFC1-201ENST00000310441 CASP14P31944 242 aa16.58■□□□□ 0.25
HCFC1-201ENST00000310441 CDH2P19022 906 aaPredicted RBP16.58■□□□□ 0.25
HCFC1-201ENST00000310441 RNF219Q5W0B1 726 aaPredicted RBP16.58■□□□□ 0.25
HCFC1-201ENST00000310441 MMS22LQ6ZRQ5 1243 aa16.58■□□□□ 0.25
HCFC1-201ENST00000310441 EPM2AIP1Q7L775 607 aaPredicted RBP16.58■□□□□ 0.25
HCFC1-201ENST00000310441 ZNF577Q9BSK1 485 aa16.58■□□□□ 0.25
HCFC1-201ENST00000310441 LRFN2Q9ULH4 789 aa16.58■□□□□ 0.25
HCFC1-201ENST00000310441 PCDHA4Q9UN74 947 aa16.58■□□□□ 0.25
HCFC1-201ENST00000310441 MAP3K15Q6ZN16 1313 aa16.58■□□□□ 0.25
HCFC1-201ENST00000310441 MIF4GDA9UHW6 222 aaKnown RBP16.58■□□□□ 0.24
HCFC1-201ENST00000310441 CALB1P05937 261 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 NBPF20Q3BBV1 942 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 GIMAP8Q8ND71 665 aaPredicted RBP16.58■□□□□ 0.24
HCFC1-201ENST00000310441 STAMBPL1Q96FJ0 436 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 PLEKHA4Q9H4M7 779 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 COPEO14579 308 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 ACBD5Q5T8D3 534 aaPredicted RBP16.58■□□□□ 0.24
HCFC1-201ENST00000310441 OLFML3Q9NRN5 406 aa16.58■□□□□ 0.24
HCFC1-201ENST00000310441 WASHC5Q12768 1159 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms