RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 RSPH10B2B2RC85 870 aa23.55■■□□□ 1.36
ATG4D-201ENST00000309469 RNF225M0QZC1 329 aaPredicted RBP23.55■■□□□ 1.36
ATG4D-201ENST00000309469 TRAF5O00463 557 aa23.55■■□□□ 1.36
ATG4D-201ENST00000309469 NKRFO15226 690 aaKnown RBP eCLIP23.55■■□□□ 1.36
ATG4D-201ENST00000309469 RSPH10BP0C881 870 aa23.55■■□□□ 1.36
ATG4D-201ENST00000309469 VSIG10LQ86VR7 867 aa23.55■■□□□ 1.36
ATG4D-201ENST00000309469 BANK1Q8NDB2 785 aa23.55■■□□□ 1.36
ATG4D-201ENST00000309469 ACAD9Q9H845 621 aa23.55■■□□□ 1.36
ATG4D-201ENST00000309469 CCND2P30279 289 aa23.54■■□□□ 1.36
ATG4D-201ENST00000309469 CASP5P51878 434 aa23.54■■□□□ 1.36
ATG4D-201ENST00000309469 PLS1Q14651 629 aa23.54■■□□□ 1.36
ATG4D-201ENST00000309469 VWA3BQ502W6 1294 aa23.54■■□□□ 1.36
ATG4D-201ENST00000309469 TREML2Q5T2D2 321 aa23.54■■□□□ 1.36
ATG4D-201ENST00000309469 EPM2AIP1Q7L775 607 aaPredicted RBP23.54■■□□□ 1.36
ATG4D-201ENST00000309469 ZC3H15Q8WU90 426 aaKnown RBP23.54■■□□□ 1.36
ATG4D-201ENST00000309469 MAF1Q9H063 256 aa23.54■■□□□ 1.36
ATG4D-201ENST00000309469 ZSCAN12O43309 604 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 P4HBP07237 508 aaKnown RBP23.53■■□□□ 1.36
ATG4D-201ENST00000309469 GAP43P17677 238 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 FECHP22830 423 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 EPHX2P34913 555 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 CDCA5Q96FF9 252 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 CEP63Q96MT8 703 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 ABHD10Q9NUJ1 306 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 CYP39A1Q9NYL5 469 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 KIF2AO00139 706 aaPredicted RBP23.53■■□□□ 1.36
ATG4D-201ENST00000309469 NR3C2P08235 984 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 NF2P35240 595 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 MAN2A1Q16706 1144 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 FKBP15Q5T1M5 1219 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 PPP4R3CPQ6ZMV5 832 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 NSUN6Q8TEA1 469 aaKnown RBP23.53■■□□□ 1.36
ATG4D-201ENST00000309469 ZSWIM4Q9H7M6 989 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 ELP3Q9H9T3 547 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 KCND2Q9NZV8 630 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 PPP2R2CQ9Y2T4 447 aa23.53■■□□□ 1.36
ATG4D-201ENST00000309469 TESPA1A2RU30 521 aaPredicted RBP23.52■■□□□ 1.36
ATG4D-201ENST00000309469 KRT9P35527 623 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 PPATQ06203 517 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 SYCP1Q15431 976 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 TOGARAM2Q6ZUX3 1019 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 REXO1L1PQ8IX06 675 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 ERGIC2Q96RQ1 377 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 NUP58Q9BVL2 599 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 NDST4Q9H3R1 872 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 MRPL44Q9H9J2 332 aaKnown RBP23.52■■□□□ 1.36
ATG4D-201ENST00000309469 POLD4Q9HCU8 107 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 A1CFQ9NQ94 594 aaKnown RBP23.52■■□□□ 1.36
ATG4D-201ENST00000309469 OLFML3Q9NRN5 406 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 CAPN11Q9UMQ6 739 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 PAXBP1Q9Y5B6 917 aa23.52■■□□□ 1.36
ATG4D-201ENST00000309469 COL11A1P12107 1806 aaPredicted RBP23.52■■□□□ 1.36
ATG4D-201ENST00000309469 TTC26A0AVF1 554 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 SOWAHDA6NJG2 315 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 ATP9AO75110 1047 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 FAM13AO94988 1023 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 KNOP1Q1ED39 458 aaKnown RBP23.51■■□□□ 1.35
ATG4D-201ENST00000309469 ANKRD13AQ8IZ07 590 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 SAMM50Q9Y512 469 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 WDR90Q96KV7 1748 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 PAPPA2Q9BXP8 1791 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 SFI1A8K8P3 1242 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 GNA14O95837 355 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 MYBP10242 640 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 BMT2Q1RMZ1 405 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 EDRF1Q3B7T1 1238 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 NLRX1Q86UT6 975 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 ERO1BQ86YB8 467 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 ZC3H3Q8IXZ2 948 aaKnown RBP23.51■■□□□ 1.35
ATG4D-201ENST00000309469 RETREG2Q8NC44 543 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 ZNF592Q92610 1267 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 BCAS3Q9H6U6 928 aa23.51■■□□□ 1.35
ATG4D-201ENST00000309469 LUC7L2Q9Y383 392 aaKnown RBP23.51■■□□□ 1.35
ATG4D-201ENST00000309469 ARHGEF35A5YM69 484 aa23.5■■□□□ 1.35
ATG4D-201ENST00000309469 HOXD13P35453 343 aa23.5■■□□□ 1.35
ATG4D-201ENST00000309469 MTF1Q14872 753 aa23.5■■□□□ 1.35
ATG4D-201ENST00000309469 RAD9BQ6WBX8 426 aa23.5■■□□□ 1.35
ATG4D-201ENST00000309469 LBX2Q6XYB7 198 aa23.5■■□□□ 1.35
ATG4D-201ENST00000309469 TMTC1Q8IUR5 882 aa23.5■■□□□ 1.35
ATG4D-201ENST00000309469 GPRASP2Q96D09 838 aa23.5■■□□□ 1.35
ATG4D-201ENST00000309469 OTUD5Q96G74 571 aa23.5■■□□□ 1.35
ATG4D-201ENST00000309469 CLMNQ96JQ2 1002 aa23.5■■□□□ 1.35
ATG4D-201ENST00000309469 TRAF3IP3Q9Y228 551 aa23.5■■□□□ 1.35
ATG4D-201ENST00000309469 RASSF10A6NK89 507 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 IRF6O14896 467 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 MAFGO15525 162 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 PRPF6O94906 941 aaKnown RBP23.49■■□□□ 1.35
ATG4D-201ENST00000309469 TUBB4AP04350 444 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 QARSP47897 775 aaKnown RBP23.49■■□□□ 1.35
ATG4D-201ENST00000309469 GADL1Q6ZQY3 521 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 MOB2Q70IA6 237 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 MYCT1Q8N699 235 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 CHST13Q8NET6 341 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 INPP4AQ96PE3 977 aaPredicted RBP23.49■■□□□ 1.35
ATG4D-201ENST00000309469 PARVGQ9HBI0 331 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 ODF2LQ9ULJ1 636 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 A0A0G2JLL6 359 aaPredicted RBP23.49■■□□□ 1.35
ATG4D-201ENST00000309469 DYNC1I1O14576 645 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 LYPLA2O95372 231 aa23.49■■□□□ 1.35
ATG4D-201ENST00000309469 GCNT3O95395 438 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms