RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 CDC27P30260 824 aa20.08■□□□□ 0.8
UBXN2A-201ENST00000309033 DNAAF3Q8N9W5 541 aa20.08■□□□□ 0.8
UBXN2A-201ENST00000309033 MRPL47Q9HD33 250 aaKnown RBP20.08■□□□□ 0.8
UBXN2A-201ENST00000309033 CPSF2Q9P2I0 782 aaKnown RBP20.08■□□□□ 0.8
UBXN2A-201ENST00000309033 EIF3CLB5ME19 914 aaKnown RBP20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L15C9J2P7 530 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L13C9JLJ4 530 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L11C9JVI0 530 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L18D6R9N7 530 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L22D6RA61 530 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L17D6RBQ6 530 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L19D6RCP7 530 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L20D6RJB6 530 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 CRKP46108 304 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L24Q0WX57 530 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L6PQ6QN14 398 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 ABI1Q8IZP0 508 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 CDHR1Q96JP9 859 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 GBP5Q96PP8 586 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 EIF3CQ99613 913 aaKnown RBP20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 ABCB6Q9NP58 842 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 DR1Q01658 176 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 PFKFB3Q16875 520 aaPredicted RBP20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 MAP3K21Q5TCX8 1036 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 SEPT12Q8IYM1 358 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 SPZ1Q9BXG8 430 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 ZWILCHQ9H900 591 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 IPO11Q9UI26 975 aaKnown RBP20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 MED7O43513 233 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 SRGAP2O75044 1071 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 PTPREP23469 700 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 ASPHQ12797 758 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 GBP7Q8N8V2 638 aaPredicted RBP20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 LY9Q9HBG7 655 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 FIS1Q9Y3D6 152 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 RXRBP28702 533 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 CASP2P42575 452 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 C10orf76Q5T2E6 689 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 FAM160B2Q86V87 743 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 ENAHQ8N8S7 591 aaPredicted RBP20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 NBPF3Q9H094 633 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 ARHGEF18Q6ZSZ5 1173 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 BRINP3Q76B58 766 aa20.07■□□□□ 0.8
UBXN2A-201ENST00000309033 CDO1Q16878 200 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 TBC1D9BQ66K14 1250 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 RNF207Q6ZRF8 634 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 NOVA2Q9UNW9 492 aaKnown RBP20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 E9PMD0 336 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 METTL23Q86XA0 190 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 CELF1Q92879 486 aaKnown RBP20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 FNDC3AQ9Y2H6 1198 aaKnown RBP20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 SART1O43290 800 aaKnown RBP20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 TMEM179Q6ZVK1 233 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 DBN1Q16643 649 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 FAM133BQ5BKY9 247 aaKnown RBP20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 HSPH1Q92598 858 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 PLA2R1Q13018 1463 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 WDR91A4D1P6 747 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 USP17L10C9JJH3 530 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 RFX1P22670 979 aa20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 ALKBH5Q6P6C2 394 aaKnown RBP20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 FOXP4Q8IVH2 680 aaPredicted RBP20.06■□□□□ 0.8
UBXN2A-201ENST00000309033 CTNND1O60716 968 aaKnown RBP20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 ARL4AP40617 200 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 RSPH3Q86UC2 560 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 SFR1Q86XK3 245 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 PFDN6O15212 129 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 SNCBQ16143 134 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 CIAPIN1Q6FI81 312 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 NFU1Q9UMS0 254 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 ZBTB5O15062 677 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 GPC4O75487 556 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 MB21D2Q8IYB1 491 aaPredicted RBP20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 CACYBPQ9HB71 228 aaKnown RBP20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 PRPSAP2O60256 369 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 RNASELQ05823 741 aaKnown RBP20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 UNC13DQ70J99 1090 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 RYBPQ8N488 228 aaPredicted RBP20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 MASTLQ96GX5 879 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 ABCB11O95342 1321 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 MAP2K2P36507 400 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 ZNF394Q53GI3 561 aa20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 TDRD3Q9H7E2 651 aaKnown RBP20.05■□□□□ 0.8
UBXN2A-201ENST00000309033 ABCC3O15438 1527 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 FRMD3A2A2Y4 597 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 ATP8B1O43520 1251 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 PALMO75781 387 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 SRGAP2BP0DMP2 458 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 PRCPP42785 496 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 RPF1Q9H9Y2 349 aaKnown RBP20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 RPAP1Q9BWH6 1393 aaPredicted RBP20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 CPDO75976 1380 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 KRT3P12035 628 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 ZNF526Q8TF50 670 aaPredicted RBP20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 DCAF4Q8WV16 495 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 RAVER2Q9HCJ3 691 aaKnown RBP20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 K7ERI5 159 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 MYO1EQ12965 1108 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 MUM1L1Q5H9M0 696 aa20.04■□□□□ 0.8
UBXN2A-201ENST00000309033 MYLK4Q86YV6 388 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms