RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SMARCAD1Q9H4L7 1026 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 PRDM12Q9H4Q4 367 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 SH3GLB2Q9NR46 395 aa22.59■■□□□ 1.21
PDZRN3-202ENST00000308537 SCRN1Q12765 414 aa22.58■■□□□ 1.21
PDZRN3-202ENST00000308537 ABHD15Q6UXT9 468 aa22.58■■□□□ 1.21
PDZRN3-202ENST00000308537 PLA2G4DQ86XP0 818 aa22.58■■□□□ 1.21
PDZRN3-202ENST00000308537 SLC17A8Q8NDX2 589 aa22.58■■□□□ 1.21
PDZRN3-202ENST00000308537 DBF4BQ8NFT6 615 aa22.58■■□□□ 1.21
PDZRN3-202ENST00000308537 TPCN1Q9ULQ1 816 aa22.58■■□□□ 1.21
PDZRN3-202ENST00000308537 PRRC2BQ5JSZ5 2229 aaKnown RBP22.58■■□□□ 1.2
PDZRN3-202ENST00000308537 CA3P07451 260 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 CTSHP09668 335 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 GNAT1P11488 350 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 MGAT3Q09327 533 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 PPFIA1Q13136 1202 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 GRIK4Q16099 956 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 MCTP2Q6DN12 878 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 SPRED2Q7Z698 418 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 USP38Q8NB14 1042 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 CCDC148Q8NFR7 591 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 ZBTB10Q96DT7 871 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 SDF4Q9BRK5 362 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 SLC28A3Q9HAS3 691 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 MYH9P35579 1960 aaKnown RBP22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 LOXHD1Q8IVV2 1947 aa22.57■■□□□ 1.2
PDZRN3-202ENST00000308537 ABHD14A-ACY1A0A1B0GW23 586 aa22.56■■□□□ 1.2
PDZRN3-202ENST00000308537 CHRNA1P02708 482 aa22.56■■□□□ 1.2
PDZRN3-202ENST00000308537 INSRRP14616 1297 aa22.56■■□□□ 1.2
PDZRN3-202ENST00000308537 AKAP17AQ02040 695 aaKnown RBP22.56■■□□□ 1.2
PDZRN3-202ENST00000308537 STK3Q13188 491 aa22.56■■□□□ 1.2
PDZRN3-202ENST00000308537 PLCB4Q15147 1175 aa22.56■■□□□ 1.2
PDZRN3-202ENST00000308537 PLPPR4Q7Z2D5 763 aa22.56■■□□□ 1.2
PDZRN3-202ENST00000308537 CCDC60Q8IWA6 550 aaPredicted RBP22.56■■□□□ 1.2
PDZRN3-202ENST00000308537 GLG1Q92896 1179 aa22.56■■□□□ 1.2
PDZRN3-202ENST00000308537 TTC28Q96AY4 2481 aa22.56■■□□□ 1.2
PDZRN3-202ENST00000308537 LCHNA4D1U4 455 aa22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 IPO5O00410 1097 aaKnown RBP22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 PFKFB2O60825 505 aa22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 DTNBO60941 627 aa22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 DEXIO95424 95 aa22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 CTDNEP1O95476 244 aa22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 SSRP1Q08945 709 aaKnown RBP22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 PPP2R2DQ66LE6 453 aa22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 DAGLBQ8NCG7 672 aa22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 UIMC1Q96RL1 719 aa22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 TUBE1Q9UJT0 475 aa22.55■■□□□ 1.2
PDZRN3-202ENST00000308537 EPOPA6NHQ4 379 aa22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 DDX39AO00148 427 aaKnown RBP22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 GJB5O95377 273 aa22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 ATP4AP20648 1035 aa22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 ZNF76P36508 570 aa22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 STAT5BP51692 787 aa22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 AK2P54819 239 aa22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 TAP1Q03518 808 aa22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 TAF2Q6P1X5 1199 aa22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 BICD2Q8TD16 824 aa22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 PCDHA4Q9UN74 947 aa22.54■■□□□ 1.2
PDZRN3-202ENST00000308537 EVPLQ92817 2033 aa22.53■■□□□ 1.2
PDZRN3-202ENST00000308537 LARGE1O95461 756 aa22.53■■□□□ 1.2
PDZRN3-202ENST00000308537 SETQ01105 290 aaPredicted RBP22.53■■□□□ 1.2
PDZRN3-202ENST00000308537 TRIM22Q8IYM9 498 aa22.53■■□□□ 1.2
PDZRN3-202ENST00000308537 TRAPPC12Q8WVT3 735 aa22.53■■□□□ 1.2
PDZRN3-202ENST00000308537 COL4A4P53420 1690 aaPredicted RBP22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 ZBTB42B2RXF5 422 aa22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 CPLX1O14810 134 aa22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 EFCAB14O75071 495 aa22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 KCNJ6P48051 423 aa22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 IKBKEQ14164 716 aa22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 PRR16Q569H4 304 aa22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 DNAJB3Q8WWF6 145 aa22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 ZNF577Q9BSK1 485 aa22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 STK36Q9NRP7 1315 aa22.52■■□□□ 1.2
PDZRN3-202ENST00000308537 MSH4O15457 936 aa22.51■■□□□ 1.19
PDZRN3-202ENST00000308537 USP11P51784 963 aa22.51■■□□□ 1.19
PDZRN3-202ENST00000308537 NLRP5P59047 1200 aa22.51■■□□□ 1.19
PDZRN3-202ENST00000308537 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.51■■□□□ 1.19
PDZRN3-202ENST00000308537 FAM177A1Q8N128 213 aaPredicted RBP22.51■■□□□ 1.19
PDZRN3-202ENST00000308537 MBOAT7Q96N66 472 aa22.51■■□□□ 1.19
PDZRN3-202ENST00000308537 AZI2Q9H6S1 392 aa22.51■■□□□ 1.19
PDZRN3-202ENST00000308537 GJB4Q9NTQ9 266 aa22.51■■□□□ 1.19
PDZRN3-202ENST00000308537 TBC1D22BQ9NU19 505 aa22.51■■□□□ 1.19
PDZRN3-202ENST00000308537 TTC3P53804 2025 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 COL4A6Q14031 1691 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 BRWD1Q9NSI6 2320 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 RRN3P2A6NIE6 340 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 FDPSP14324 419 aaKnown RBP22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 SLC26A2P50443 739 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 IGBP1P78318 339 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 ST3GAL1Q11201 340 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 LPIN1Q14693 890 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 ME3Q16798 604 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 ZNF746Q6NUN9 644 aaPredicted RBP22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 BLIDQ8IZY5 108 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 TBCKQ8TEA7 893 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 ATP8B4Q8TF62 1192 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 PHF20Q9BVI0 1012 aa22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 MAFBQ9Y5Q3 323 aaPredicted RBP22.5■■□□□ 1.19
PDZRN3-202ENST00000308537 CYP3A7-CYP3A51PA0A087WV96 503 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms