RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 DMPKQ09013 629 aa11.39□□□□□ -0.59
MSRB3-201ENST00000308259 SLC5A9Q2M3M2 681 aa11.39□□□□□ -0.59
MSRB3-201ENST00000308259 PPP1R15BQ5SWA1 713 aa11.39□□□□□ -0.59
MSRB3-201ENST00000308259 KLHL7Q8IXQ5 586 aa11.39□□□□□ -0.59
MSRB3-201ENST00000308259 OPTNQ96CV9 577 aa11.39□□□□□ -0.59
MSRB3-201ENST00000308259 NAF1Q96HR8 494 aaKnown RBP11.39□□□□□ -0.59
MSRB3-201ENST00000308259 EPB41L5Q9HCM4 733 aa11.39□□□□□ -0.59
MSRB3-201ENST00000308259 NOVA2Q9UNW9 492 aaKnown RBP11.39□□□□□ -0.59
MSRB3-201ENST00000308259 PARP4Q9UKK3 1724 aaKnown RBP11.39□□□□□ -0.59
MSRB3-201ENST00000308259 COL1A1P02452 1464 aaPredicted RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 CNTNAP5Q8WYK1 1306 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 ANKRD33BA6NCL7 494 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 EN1Q05925 392 aaPredicted RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 TYW1BQ6NUM6 668 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 RUFY4Q6ZNE9 571 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 ZC3H18Q86VM9 953 aaKnown RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 VSIG1Q86XK7 387 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 SLC44A5Q8NCS7 719 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 TAF4BQ92750 862 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 FAM84BQ96KN1 310 aaPredicted RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 MCM9Q9NXL9 1143 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 PCDHGC5Q9Y5F6 944 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 MYH2Q9UKX2 1941 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 TTC26A0AVF1 554 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 RNF8O76064 485 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 RPN1P04843 607 aaKnown RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 ATP1A1P05023 1023 aaKnown RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 SCG2P13521 617 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 EIF6P56537 245 aaKnown RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 ATP2C1P98194 919 aaPredicted RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 TCP11X2Q5H9J9 407 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 CCDC80Q76M96 950 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 NCAPG2Q86XI2 1143 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 MGARPQ8TDB4 240 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 C17orf50Q8WW18 174 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 HAUS1Q96CS2 278 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 TMEM60Q9H2L4 133 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 ATP2B4P23634 1241 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 UBE4AQ14139 1066 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 PDXDC2PQ6P474 469 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 MAB21L3Q8N8X9 362 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 GPR101Q96P66 508 aaPredicted RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 EPN1Q9Y6I3 576 aaPredicted RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 AKR1B10O60218 316 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 UFL1O94874 794 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 VPS41P49754 854 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 COG7P83436 770 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 HEATR3Q7Z4Q2 680 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 TXNRD3Q86VQ6 643 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 KSR1Q8IVT5 923 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 PRCCQ92733 491 aaPredicted RBP11.38□□□□□ -0.59
MSRB3-201ENST00000308259 TNFRSF25Q93038 417 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 TRIM7Q9C029 511 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 RABL2BQ9UNT1 228 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 DUSP10Q9Y6W6 482 aa11.38□□□□□ -0.59
MSRB3-201ENST00000308259 CNTNAP4Q9C0A0 1308 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 TMEM110-MUSTN1A8MSY1 372 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 GCLCP48506 637 aaPredicted RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 MRPS35P82673 323 aaKnown RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 GBP7Q8N8V2 638 aaPredicted RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 DYDC2Q96IM9 177 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 CTAGE1Q96RT6 745 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 LRRC1Q9BTT6 524 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 MINPP1Q9UNW1 487 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 DDX60Q8IY21 1712 aaKnown RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 DPPA5A6NC42 116 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 SHOX2O60902 331 aaPredicted RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 SMNDC1O75940 238 aaKnown RBP eCLIP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 CYP27A1Q02318 531 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 GALNT17Q6IS24 598 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 VAT1LQ9HCJ6 419 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 REXO2Q9Y3B8 237 aaKnown RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 LRP6O75581 1613 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 RFC5P40937 340 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 ANKRD20A2Q5SQ80 823 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 ANKRD20A1Q5TYW2 823 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 ANKRD20A3Q5VUR7 823 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 GRAMD4Q6IC98 578 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 ARHGEF2Q92974 986 aaKnown RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 DCP1AQ9NPI6 582 aaPredicted RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 SAP30BPQ9UHR5 308 aaKnown RBP11.37□□□□□ -0.59
MSRB3-201ENST00000308259 STX8Q9UNK0 236 aa11.37□□□□□ -0.59
MSRB3-201ENST00000308259 HLA-DOAP06340 250 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 MMP10P09238 476 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 TFAP4Q01664 338 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 GPR162Q16538 588 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 EMBQ6PCB8 327 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 ELOA2Q8IYF1 753 aaPredicted RBP11.36□□□□□ -0.59
MSRB3-201ENST00000308259 ARHGAP18Q8N392 663 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 LRRC15Q8TF66 581 aa11.36□□□□□ -0.59
MSRB3-201ENST00000308259 HIC2Q96JB3 615 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms