RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 PLEKHG2Q9H7P9 1386 aa20.91■□□□□ 0.94
TSR1-201ENST00000301364 YARSP54577 528 aaKnown RBP20.91■□□□□ 0.94
TSR1-201ENST00000301364 EPC1Q9H2F5 836 aa20.91■□□□□ 0.94
TSR1-201ENST00000301364 PLAAQ9Y263 795 aa20.91■□□□□ 0.94
TSR1-201ENST00000301364 CHGBP05060 677 aa20.91■□□□□ 0.94
TSR1-201ENST00000301364 FMR1Q06787 632 aaKnown RBP eCLIP20.91■□□□□ 0.94
TSR1-201ENST00000301364 SCYL2Q6P3W7 929 aa20.91■□□□□ 0.94
TSR1-201ENST00000301364 TMEM179Q6ZVK1 233 aa20.91■□□□□ 0.94
TSR1-201ENST00000301364 RASGRP2Q7LDG7 609 aa20.91■□□□□ 0.94
TSR1-201ENST00000301364 ZCCHC17Q9NP64 241 aaKnown RBP20.91■□□□□ 0.94
TSR1-201ENST00000301364 ADD3Q9UEY8 706 aaKnown RBP20.91■□□□□ 0.94
TSR1-201ENST00000301364 KCNH2Q12809 1159 aa20.9■□□□□ 0.94
TSR1-201ENST00000301364 FAM160B2Q86V87 743 aa20.9■□□□□ 0.94
TSR1-201ENST00000301364 FAM20AQ96MK3 541 aa20.9■□□□□ 0.94
TSR1-201ENST00000301364 MYCBPQ99417 103 aaPredicted RBP20.9■□□□□ 0.94
TSR1-201ENST00000301364 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.9■□□□□ 0.94
TSR1-201ENST00000301364 CELF1Q92879 486 aaKnown RBP20.9■□□□□ 0.94
TSR1-201ENST00000301364 ANKFY1Q9P2R3 1169 aa20.9■□□□□ 0.94
TSR1-201ENST00000301364 HESX1Q9UBX0 185 aa20.9■□□□□ 0.94
TSR1-201ENST00000301364 SALL3Q9BXA9 1300 aa20.9■□□□□ 0.94
TSR1-201ENST00000301364 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.9■□□□□ 0.94
TSR1-201ENST00000301364 SLC7A3Q8WY07 619 aa20.9■□□□□ 0.94
TSR1-201ENST00000301364 CCT6BQ92526 530 aa20.9■□□□□ 0.94
TSR1-201ENST00000301364 GFPT1Q06210 699 aaPredicted RBP20.9■□□□□ 0.94
TSR1-201ENST00000301364 RUBCNQ92622 972 aa20.9■□□□□ 0.94
TSR1-201ENST00000301364 CDHR1Q96JP9 859 aa20.9■□□□□ 0.94
TSR1-201ENST00000301364 DPYDQ12882 1025 aa20.89■□□□□ 0.94
TSR1-201ENST00000301364 COG1Q8WTW3 980 aa20.89■□□□□ 0.94
TSR1-201ENST00000301364 CFAP57Q96MR6 1250 aa20.89■□□□□ 0.94
TSR1-201ENST00000301364 COL15A1P39059 1388 aa20.89■□□□□ 0.94
TSR1-201ENST00000301364 RWDD2BP57060 319 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 FAM160B1Q5W0V3 765 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 SRBD1Q8N5C6 995 aaKnown RBP20.89■□□□□ 0.93
TSR1-201ENST00000301364 DNAJC12Q9UKB3 198 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 FRMPD1Q5SYB0 1578 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 KCNQ4P56696 695 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 FAM84BQ96KN1 310 aaPredicted RBP20.89■□□□□ 0.93
TSR1-201ENST00000301364 ADPGKQ9BRR6 497 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 SUGCTQ9HAC7 445 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 LUC7L3O95232 432 aaKnown RBP20.89■□□□□ 0.93
TSR1-201ENST00000301364 NR3C1P04150 777 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 TPD52P55327 224 aaPredicted RBP20.89■□□□□ 0.93
TSR1-201ENST00000301364 SNX1Q13596 522 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 NYAP1Q6ZVC0 841 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 PAXIP1Q6ZW49 1069 aaPredicted RBP20.89■□□□□ 0.93
TSR1-201ENST00000301364 CEP95Q96GE4 821 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 CEP170P1Q96L14 293 aa20.89■□□□□ 0.93
TSR1-201ENST00000301364 SEPT9Q9UHD8 586 aaPredicted RBP20.89■□□□□ 0.93
TSR1-201ENST00000301364 PP2D1A8MPX8 630 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 METTL13Q8N6R0 699 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 KLHL29Q96CT2 875 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 SYNGAP1Q96PV0 1343 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 INHBAP08476 426 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 PDCLQ13371 301 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 RINT1Q6NUQ1 792 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 TC2NQ8N9U0 490 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 TTC16Q8NEE8 873 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 NEDD1Q8NHV4 660 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 EFCC1Q9HA90 598 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 MROH7-TTC4A0A0A0MT08 1334 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 DIP2CQ9Y2E4 1556 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 CPVLQ9H3G5 476 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 DBNDD1Q9H9R9 158 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 CD209Q9NNX6 404 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 HDAC6Q9UBN7 1215 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 SGK1O00141 431 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 CRCPO75575 148 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 CTTNQ14247 550 aaKnown RBP20.88■□□□□ 0.93
TSR1-201ENST00000301364 PPP2R5DQ14738 602 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 PDIA6Q15084 440 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 NAALADL2Q58DX5 795 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 RBM43Q6ZSC3 357 aaKnown RBP20.88■□□□□ 0.93
TSR1-201ENST00000301364 SFR1Q86XK3 245 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 ADSSL1Q8N142 457 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 PCDHA6Q9UN73 950 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 PCDHA8Q9Y5H6 950 aa20.88■□□□□ 0.93
TSR1-201ENST00000301364 BSPRYQ5W0U4 402 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 SLC44A5Q8NCS7 719 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 TMOD1P28289 359 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 MRPS9P82933 396 aaKnown RBP20.87■□□□□ 0.93
TSR1-201ENST00000301364 KNOP1Q1ED39 458 aaKnown RBP20.87■□□□□ 0.93
TSR1-201ENST00000301364 TBC1D9BQ66K14 1250 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 NFRKBQ6P4R8 1299 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 TRIM50Q86XT4 487 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 TCP11Q8WWU5 503 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 E9PMD0 336 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 ATP1A1P05023 1023 aaKnown RBP20.87■□□□□ 0.93
TSR1-201ENST00000301364 MRPS25P82663 173 aaKnown RBP20.87■□□□□ 0.93
TSR1-201ENST00000301364 CYP4F22Q6NT55 531 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 PDZD4Q76G19 769 aaPredicted RBP20.87■□□□□ 0.93
TSR1-201ENST00000301364 TADA2BQ86TJ2 420 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 SLCO1A2P46721 670 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 YWHAGP61981 247 aaKnown RBP eCLIP20.87■□□□□ 0.93
TSR1-201ENST00000301364 TRIM9Q9C026 710 aa20.87■□□□□ 0.93
TSR1-201ENST00000301364 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 SLC12A2P55011 1212 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 H7C0C1 242 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 ATP5OP48047 213 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 VSNL1P62760 191 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 TRIM42Q8IWZ5 723 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms