RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 NOX5Q96PH1 765 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 REEP2Q9BRK0 252 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 TMX4Q9H1E5 349 aaPredicted RBP14.2□□□□□ -0.14
HIF3A-204ENST00000300862 ACBD3Q9H3P7 528 aa14.2□□□□□ -0.14
HIF3A-204ENST00000300862 SMCHD1A6NHR9 2005 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 SSU72P8A0A1W2PR75 194 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 SFI1A8K8P3 1242 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 PALMO75781 387 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 SERPING1P05155 500 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 SLC9A1P19634 815 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 HOXD13P35453 343 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 KCNA1Q09470 495 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 GIT2Q14161 759 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 PTPROQ16827 1216 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 IQCEQ6IPM2 695 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 SND1Q7KZF4 910 aaKnown RBP eCLIP14.19□□□□□ -0.14
HIF3A-204ENST00000300862 DCAF4Q8WV16 495 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 MKL1Q969V6 931 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 LENG9Q96B70 501 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 AMNQ9BXJ7 453 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 TDRD3Q9H7E2 651 aaKnown RBP14.19□□□□□ -0.14
HIF3A-204ENST00000300862 QTRT2Q9H974 415 aaKnown RBP14.19□□□□□ -0.14
HIF3A-204ENST00000300862 RBM12Q9NTZ6 932 aaKnown RBP14.19□□□□□ -0.14
HIF3A-204ENST00000300862 RGL1Q9NZL6 768 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 NYAP2Q9P242 653 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 LRRC37AA6NMS7 1700 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 CYP3A7-CYP3A51PA0A087WV96 503 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 FAM170AA1A519 330 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 CETN3O15182 167 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 PJA2O43164 708 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 TCP1P17987 556 aaKnown RBP14.19□□□□□ -0.14
HIF3A-204ENST00000300862 CYP3A7P24462 503 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 KLHL30Q0D2K2 578 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 LRRC31Q6UY01 552 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 FBXO11Q86XK2 927 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 SLFN12Q8IYM2 578 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 MMGT1Q8N4V1 131 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 MED4Q9NPJ6 270 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 ANKRD31Q8N7Z5 1873 aa14.19□□□□□ -0.14
HIF3A-204ENST00000300862 SPDYE3A6NKU9 549 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 AGPSO00116 658 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 GH2P01242 217 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 POLD1P28340 1107 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 ALDH1B1P30837 517 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 RRP1BQ14684 758 aaKnown RBP14.18□□□□□ -0.14
HIF3A-204ENST00000300862 KCTD19Q17RG1 926 aaPredicted RBP14.18□□□□□ -0.14
HIF3A-204ENST00000300862 KIAA0753Q2KHM9 967 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 ABCB5Q2M3G0 1257 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 DCAF17Q5H9S7 520 aaPredicted RBP14.18□□□□□ -0.14
HIF3A-204ENST00000300862 CRYGNQ8WXF5 182 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 EDEM3Q9BZQ6 932 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 BHMT2Q9H2M3 363 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 HDAC9Q9UKV0 1011 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 DNM3Q9UQ16 869 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 OPLAHO14841 1288 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 HAUS3Q68CZ6 603 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 CCDC70Q6NSX1 233 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 MBOAT7Q96N66 472 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 NAP1L4Q99733 375 aaKnown RBP14.18□□□□□ -0.14
HIF3A-204ENST00000300862 GANQ9H2C0 597 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 GOLPH3Q9H4A6 298 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 VIPAS39Q9H9C1 493 aa14.18□□□□□ -0.14
HIF3A-204ENST00000300862 A0A1W2PRG0 241 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 FRMD3A2A2Y4 597 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 EML1O00423 815 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 CLIC2O15247 247 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 MSH4O15457 936 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 GNA14O95837 355 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 PRLRP16471 622 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 PAFAH1B1P43034 410 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 AARSP49588 968 aaKnown RBP eCLIP14.17□□□□□ -0.14
HIF3A-204ENST00000300862 CASP4P49662 377 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 DACT2Q5SW24 774 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 TCERG1LQ5VWI1 586 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 PODNQ7Z5L7 613 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 PACS2Q86VP3 889 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 NLGN1Q8N2Q7 840 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 PIGOQ8TEQ8 1089 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 RUSC1Q9BVN2 902 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 ZSCAN5CA6NGD5 496 aaPredicted RBP14.17□□□□□ -0.14
HIF3A-204ENST00000300862 RBAK-RBAKDNI3L0D1 243 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 ZBTB39O15060 712 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 ECE2O60344 883 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 RPA1P27694 616 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 UBXN2AP68543 259 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 AP3B2Q13367 1082 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 ASIC2Q16515 512 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 SLC18A3Q16572 532 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 SKIDA1Q1XH10 827 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 SYDE2Q5VT97 1194 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 FOXR2Q6PJQ5 311 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 KRT27Q7Z3Y8 459 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 AENQ8WTP8 325 aaKnown RBP14.17□□□□□ -0.14
HIF3A-204ENST00000300862 MASTLQ96GX5 879 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 GLT8D2Q9H1C3 349 aa14.17□□□□□ -0.14
HIF3A-204ENST00000300862 ESYT3A0FGR9 886 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 ANKRD65E5RJM6 399 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 CHMP2AO43633 222 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 AKAP3O75969 853 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 ZNF76P36508 570 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms