RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 KAT2BQ92831 832 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 KCNF1Q9H3M0 494 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.06□□□□□ -0.48
VWA3A-201ENST00000299840 PCDHA1Q9Y5I3 950 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 OPLAHO14841 1288 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 RTN3O95197 1032 aaPredicted RBP12.05□□□□□ -0.48
VWA3A-201ENST00000299840 XBP1P17861 261 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 CDC27P30260 824 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 HSD17B4P51659 736 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 RPS6P62753 249 aaKnown RBP12.05□□□□□ -0.48
VWA3A-201ENST00000299840 RAB11FIP4Q86YS3 637 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 U2AF1L4Q8WU68 220 aaKnown RBP12.05□□□□□ -0.48
VWA3A-201ENST00000299840 SHISA4Q96DD7 197 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 C16orf45Q96MC5 204 aaPredicted RBP12.05□□□□□ -0.48
VWA3A-201ENST00000299840 TRAIPQ9BWF2 469 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 TMEM63CQ9P1W3 806 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 ASTN1O14525 1302 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 PPFIA4O75335 1185 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 ZNF865P0CJ78 1059 aaPredicted RBP12.05□□□□□ -0.48
VWA3A-201ENST00000299840 PDIA3P30101 505 aaKnown RBP12.05□□□□□ -0.48
VWA3A-201ENST00000299840 TRPC1P48995 793 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 METAP2P50579 478 aaKnown RBP eCLIP12.05□□□□□ -0.48
VWA3A-201ENST00000299840 LAMB3Q13751 1172 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 LHX8Q68G74 356 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 SLC30A10Q6XR72 485 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 ANKLE1Q8NAG6 615 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 UPF3BQ9BZI7 483 aaKnown RBP12.05□□□□□ -0.48
VWA3A-201ENST00000299840 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 SEC63Q9UGP8 760 aaKnown RBP12.05□□□□□ -0.48
VWA3A-201ENST00000299840 USP25Q9UHP3 1055 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 OGDHLQ9ULD0 1010 aa12.05□□□□□ -0.48
VWA3A-201ENST00000299840 PTPDC1A2A3K4 754 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 SEPT4O43236 478 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 KIF5CO60282 957 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 ALDH5A1P51649 535 aaPredicted RBP12.04□□□□□ -0.48
VWA3A-201ENST00000299840 CLCN6P51797 869 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 ANKRD1Q15327 319 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 ARMCX2Q7L311 632 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 SYTL5Q8TDW5 730 aaPredicted RBP12.04□□□□□ -0.48
VWA3A-201ENST00000299840 SAAL1Q96ER3 474 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 DEFB118Q96PH6 123 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 POLR3CQ9BUI4 534 aaPredicted RBP12.04□□□□□ -0.48
VWA3A-201ENST00000299840 IRF2BPLQ9H1B7 796 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 ABHD16BQ9H3Z7 469 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.04□□□□□ -0.48
VWA3A-201ENST00000299840 DDX20Q9UHI6 824 aaKnown RBP12.04□□□□□ -0.48
VWA3A-201ENST00000299840 ADAM21Q9UKJ8 722 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 hCG_1984214I3L0E3 225 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 ATP8B1O43520 1251 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 EN2P19622 333 aaPredicted RBP12.04□□□□□ -0.48
VWA3A-201ENST00000299840 EDNRBP24530 442 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 SFSWAPQ12872 951 aaKnown RBP12.04□□□□□ -0.48
VWA3A-201ENST00000299840 PREPLQ4J6C6 727 aaPredicted RBP12.04□□□□□ -0.48
VWA3A-201ENST00000299840 ZNF713Q8N859 430 aaPredicted RBP12.04□□□□□ -0.48
VWA3A-201ENST00000299840 TCP11Q8WWU5 503 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 TSGA10Q9BZW7 698 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 SPATA7Q9P0W8 599 aa12.04□□□□□ -0.48
VWA3A-201ENST00000299840 B4DLN1 442 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 ANKRD65E5RJM6 399 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 MYCP01106 439 aaPredicted RBP12.03□□□□□ -0.48
VWA3A-201ENST00000299840 IQCB1Q15051 598 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 NTRK3Q16288 839 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 KIAA1328Q86T90 577 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 CMTR1Q8N1G2 835 aaKnown RBP12.03□□□□□ -0.48
VWA3A-201ENST00000299840 B4GALNT2Q8NHY0 566 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 SYAP1Q96A49 352 aaPredicted RBP12.03□□□□□ -0.48
VWA3A-201ENST00000299840 MPHOSPH6Q99547 160 aaKnown RBP12.03□□□□□ -0.48
VWA3A-201ENST00000299840 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 CCDC175P0C221 793 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 CALML3P27482 149 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 ADD1P35611 737 aaKnown RBP12.03□□□□□ -0.48
VWA3A-201ENST00000299840 ACVR2BQ13705 512 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 PRAMEF19Q5SWL8 479 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 FOXR1Q6PIV2 292 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 TTC30AQ86WT1 665 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 MMADHCQ9H3L0 296 aaPredicted RBP12.03□□□□□ -0.48
VWA3A-201ENST00000299840 HOMER3Q9NSC5 361 aa12.03□□□□□ -0.48
VWA3A-201ENST00000299840 PIK3CDO00329 1044 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 PRPF3O43395 683 aaKnown RBP12.02□□□□□ -0.48
VWA3A-201ENST00000299840 IFNAR1P17181 557 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 CDR1P51861 262 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 CLNS1AP54105 237 aaKnown RBP12.02□□□□□ -0.48
VWA3A-201ENST00000299840 SESN3P58005 492 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 FILIP1LQ4L180 1135 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 PPP1R18Q6NYC8 613 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 TMCO3Q6UWJ1 677 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.48
VWA3A-201ENST00000299840 TAF4BQ92750 862 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 PURBQ96QR8 312 aaKnown RBP12.02□□□□□ -0.48
VWA3A-201ENST00000299840 IWS1Q96ST2 819 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 NACA2Q9H009 215 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 VTA1Q9NP79 307 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 COL20A1Q9P218 1284 aa12.02□□□□□ -0.48
VWA3A-201ENST00000299840 F8VZ95 297 aa12.02□□□□□ -0.49
VWA3A-201ENST00000299840 GCOM1H8Y6P7 765 aaPredicted RBP12.02□□□□□ -0.49
VWA3A-201ENST00000299840 TFRCP02786 760 aaKnown RBP12.02□□□□□ -0.49
VWA3A-201ENST00000299840 POLR2MP0CAP2 368 aa12.02□□□□□ -0.49
VWA3A-201ENST00000299840 AKR1A1P14550 325 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms