RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ARMC5Q96C12 935 aa6.74□□□□□ -1.33
SSX3-201ENST00000298396 RMDN3Q96TC7 470 aa6.74□□□□□ -1.33
SSX3-201ENST00000298396 BCAS3Q9H6U6 928 aa6.74□□□□□ -1.33
SSX3-201ENST00000298396 CWC22Q9HCG8 908 aaKnown RBP6.74□□□□□ -1.33
SSX3-201ENST00000298396 C6orf50Q9HD87 102 aa6.74□□□□□ -1.33
SSX3-201ENST00000298396 PDGFCQ9NRA1 345 aa6.74□□□□□ -1.33
SSX3-201ENST00000298396 MAP3K20Q9NYL2 800 aaKnown RBP6.74□□□□□ -1.33
SSX3-201ENST00000298396 TFIP11Q9UBB9 837 aaKnown RBP6.74□□□□□ -1.33
SSX3-201ENST00000298396 MTMR6Q9Y217 621 aa6.74□□□□□ -1.33
SSX3-201ENST00000298396 ZDHHC9Q9Y397 364 aa6.74□□□□□ -1.33
SSX3-201ENST00000298396 TELO2Q9Y4R8 837 aa6.74□□□□□ -1.33
SSX3-201ENST00000298396 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.74□□□□□ -1.33
SSX3-201ENST00000298396 MYH11P35749 1972 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 CEP290O15078 2479 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 IGLV3-22A0A075B6J6 115 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 RBM47A0AV96 593 aaKnown RBP6.73□□□□□ -1.33
SSX3-201ENST00000298396 FAM86B1E9PN63 330 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 DGAT1O75907 488 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 ARIH2O95376 493 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 HMGCRP04035 888 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 CYP3A4P08684 503 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 FAM86B2P0C5J1 330 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 SKIP12755 728 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 ITGB5P18084 799 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 U2AF2P26368 475 aaKnown RBP eCLIP6.73□□□□□ -1.33
SSX3-201ENST00000298396 HOXD10P28358 340 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 GNA11P29992 359 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 KRT2P35908 639 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 TOB1P50616 345 aaPredicted RBP6.73□□□□□ -1.33
SSX3-201ENST00000298396 MRPL12P52815 198 aaKnown RBP6.73□□□□□ -1.33
SSX3-201ENST00000298396 ARHGAP4P98171 946 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 AP3B2Q13367 1082 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 INF2Q27J81 1249 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 GJC2Q5T442 439 aaPredicted RBP6.73□□□□□ -1.33
SSX3-201ENST00000298396 PCNX4Q63HM2 1172 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 GALNT17Q6IS24 598 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 Q6ZVU0 165 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 EEPD1Q7L9B9 569 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 VSIG10LQ86VR7 867 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 MSL3Q8N5Y2 521 aaKnown RBP6.73□□□□□ -1.33
SSX3-201ENST00000298396 FAM184AQ8NB25 1140 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 NSUN6Q8TEA1 469 aaKnown RBP6.73□□□□□ -1.33
SSX3-201ENST00000298396 TBCKQ8TEA7 893 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 CCDC12Q8WUD4 166 aaPredicted RBP6.73□□□□□ -1.33
SSX3-201ENST00000298396 CCDC97Q96F63 343 aaPredicted RBP6.73□□□□□ -1.33
SSX3-201ENST00000298396 ZNF333Q96JL9 665 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 MBOAT7Q96N66 472 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 GLT8D2Q9H1C3 349 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 DOLKQ9UPQ8 538 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 UBIAD1Q9Y5Z9 338 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 SIP14410 1827 aa6.73□□□□□ -1.33
SSX3-201ENST00000298396 PDE4DIPQ5VU43 2346 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 LOC102724159A0A0B4J2E5 919 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 ASB14A6NK59 587 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 SPDYE3A6NKU9 549 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 CTAGE5O15320 804 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 SLC37A4O43826 429 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 TDP2O95551 362 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 FOSP01100 380 aaPredicted RBP6.72□□□□□ -1.33
SSX3-201ENST00000298396 MYCLP12524 364 aaPredicted RBP6.72□□□□□ -1.33
SSX3-201ENST00000298396 CCND2P30279 289 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 CIITAP33076 1130 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 SP2Q02086 613 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 RESTQ13127 1097 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 ACVR2BQ13705 512 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 ARHGEF6Q15052 776 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 PWP2Q15269 919 aaKnown RBP6.72□□□□□ -1.33
SSX3-201ENST00000298396 CCDC144BQ3MJ40 725 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 SLC9C1Q4G0N8 1177 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 ARHGEF16Q5VV41 709 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 LARP1BQ659C4 914 aaKnown RBP6.72□□□□□ -1.33
SSX3-201ENST00000298396 CCDC62Q6P9F0 684 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 PIK3AP1Q6ZUJ8 805 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 TEX2Q8IWB9 1127 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 BICD2Q8TD16 824 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 HPS1Q92902 700 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 COPS5Q92905 334 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 GJA10Q969M2 543 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 CHAMP1Q96JM3 812 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 INPP4AQ96PE3 977 aaPredicted RBP6.72□□□□□ -1.33
SSX3-201ENST00000298396 UIMC1Q96RL1 719 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 IWS1Q96ST2 819 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 WDR11Q9BZH6 1224 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 FOXP1Q9H334 677 aaPredicted RBP6.72□□□□□ -1.33
SSX3-201ENST00000298396 PAK6Q9NQU5 681 aaPredicted RBP6.72□□□□□ -1.33
SSX3-201ENST00000298396 RTEL1Q9NZ71 1219 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 ADD3Q9UEY8 706 aaKnown RBP6.72□□□□□ -1.33
SSX3-201ENST00000298396 WASF2Q9Y6W5 498 aa6.72□□□□□ -1.33
SSX3-201ENST00000298396 CYP3A7-CYP3A51PA0A087WV96 503 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 VPS37CA5D8V6 355 aaPredicted RBP6.71□□□□□ -1.34
SSX3-201ENST00000298396 MYADML2A6NDP7 307 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 MEIS1O00470 390 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 STX6O43752 255 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 GFRA3O60609 400 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 ATP9AO75110 1047 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 EIF3JO75822 258 aaKnown RBP6.71□□□□□ -1.34
SSX3-201ENST00000298396 ARP10275 920 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 CCL5P13501 91 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 KCNA2P16389 499 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 XBP1P17861 261 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms