RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 GHRP10912 638 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 DDIT3P35638 169 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 HYAL1Q12794 435 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 TROAPQ12815 778 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 SMAD4Q13485 552 aaKnown RBP12.12□□□□□ -0.47
RFC4-201ENST00000296273 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
RFC4-201ENST00000296273 WTAPQ15007 396 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 SLC35G1Q2M3R5 365 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 HERC4Q5GLZ8 1057 aaPredicted RBP12.12□□□□□ -0.47
RFC4-201ENST00000296273 RALYLQ86SE5 291 aaKnown RBP12.12□□□□□ -0.47
RFC4-201ENST00000296273 TRIM50Q86XT4 487 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 P2RX5Q93086 422 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 ZNF689Q96CS4 500 aaPredicted RBP12.12□□□□□ -0.47
RFC4-201ENST00000296273 FBXL18Q96ME1 805 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
RFC4-201ENST00000296273 ERAP1Q9NZ08 941 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 SQORQ9Y6N5 450 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 BRWD1Q9NSI6 2320 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 ENPP3O14638 875 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 GRM6O15303 877 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 SMARCA1P28370 1054 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 TCF7P36402 384 aaPredicted RBP12.11□□□□□ -0.47
RFC4-201ENST00000296273 MGAT3Q09327 533 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 PPFIA1Q13136 1202 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 CATIPQ7Z7H3 387 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 NCOA7Q8NI08 942 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 SEPT1Q8WYJ6 367 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 TNPO1Q92973 898 aaKnown RBP12.11□□□□□ -0.47
RFC4-201ENST00000296273 GPRASP2Q96D09 838 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 FTHL17Q9BXU8 183 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 TUBE1Q9UJT0 475 aa12.11□□□□□ -0.47
RFC4-201ENST00000296273 MBLAC1A4D2B0 266 aaPredicted RBP12.1□□□□□ -0.47
RFC4-201ENST00000296273 MAFGO15525 162 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 DGKIO75912 1065 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 HSPA4P34932 840 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 NUCB2P80303 420 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 SP4Q02446 784 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 DLX2Q07687 328 aaPredicted RBP12.1□□□□□ -0.47
RFC4-201ENST00000296273 LPIN1Q14693 890 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 PKN1Q16512 942 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 FBXO47Q5MNV8 452 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 FAM43BQ6ZT52 329 aaPredicted RBP12.1□□□□□ -0.47
RFC4-201ENST00000296273 HFE2Q6ZVN8 426 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 CMTR2Q8IYT2 770 aaKnown RBP12.1□□□□□ -0.47
RFC4-201ENST00000296273 RRP36Q96EU6 259 aaKnown RBP12.1□□□□□ -0.47
RFC4-201ENST00000296273 SPZ1Q9BXG8 430 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 SLKQ9H2G2 1235 aaPredicted RBP12.1□□□□□ -0.47
RFC4-201ENST00000296273 SEC63Q9UGP8 760 aaKnown RBP12.1□□□□□ -0.47
RFC4-201ENST00000296273 CD207Q9UJ71 328 aa12.1□□□□□ -0.47
RFC4-201ENST00000296273 RRN3P2A6NIE6 340 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 RBAK-RBAKDNI3L0D1 243 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 STXBP3O00186 592 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 MEIS2O14770 477 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 TBX10O75333 385 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 EYA4O95677 639 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 CYP21A2P08686 494 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 KIF5BP33176 963 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 NDUFV1P49821 464 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 ADAM15Q13444 863 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 GRIK4Q16099 956 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 IER5Q5VY09 327 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 USP17L6PQ6QN14 398 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 RUFY4Q6ZNE9 571 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 BMP8AQ7Z5Y6 402 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 RNF135Q8IUD6 432 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 CTCFLQ8NI51 663 aaPredicted RBP12.09□□□□□ -0.47
RFC4-201ENST00000296273 DNAJB3Q8WWF6 145 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 GBP4Q96PP9 640 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 PRRX2Q99811 253 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 LZTS2Q9BRK4 669 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 SMARCAD1Q9H4L7 1026 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 MUTYHQ9UIF7 546 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 PLAGL2Q9UPG8 496 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 CDY2AQ9Y6F7 541 aa12.09□□□□□ -0.47
RFC4-201ENST00000296273 DDX11L8A8MPP1 907 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 M0QZ92 97 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 STAG3L1P0CL83 205 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 PDIA4P13667 645 aaKnown RBP12.08□□□□□ -0.48
RFC4-201ENST00000296273 KCNA2P16389 499 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 GNAQP50148 359 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 MRPS6P82932 125 aaKnown RBP12.08□□□□□ -0.48
RFC4-201ENST00000296273 CLUL1Q15846 466 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 NPAS4Q8IUM7 802 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 EDAQ92838 391 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 GLG1Q92896 1179 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 INTS4Q96HW7 963 aaKnown RBP12.08□□□□□ -0.48
RFC4-201ENST00000296273 MSLNLQ96KJ4 702 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 MTA3Q9BTC8 594 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 IL25Q9H293 177 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 IGFLR1Q9H665 355 aa12.08□□□□□ -0.48
RFC4-201ENST00000296273 ALG13Q9NP73 1137 aaKnown RBP12.08□□□□□ -0.48
RFC4-201ENST00000296273 GSTTP1A0A1W2PQM5 241 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 FSD2A1L4K1 749 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 E7EWF7 191 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms