RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13□□□□□ -0.33
RHO-201ENST00000296271 ABCB11O95342 1321 aa13□□□□□ -0.33
RHO-201ENST00000296271 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
RHO-201ENST00000296271 KRT86O43790 486 aa13□□□□□ -0.33
RHO-201ENST00000296271 AKAP3O75969 853 aa13□□□□□ -0.33
RHO-201ENST00000296271 SLITRK3O94933 977 aa13□□□□□ -0.33
RHO-201ENST00000296271 PTPROQ16827 1216 aa13□□□□□ -0.33
RHO-201ENST00000296271 IL31RAQ8NI17 732 aa13□□□□□ -0.33
RHO-201ENST00000296271 PACSIN1Q9BY11 444 aa13□□□□□ -0.33
RHO-201ENST00000296271 LRRC27Q9C0I9 530 aa13□□□□□ -0.33
RHO-201ENST00000296271 ARFGAP3Q9NP61 516 aa13□□□□□ -0.33
RHO-201ENST00000296271 JADE2Q9NQC1 790 aa13□□□□□ -0.33
RHO-201ENST00000296271 HOMER2Q9NSB8 354 aa13□□□□□ -0.33
RHO-201ENST00000296271 COL20A1Q9P218 1284 aa13□□□□□ -0.33
RHO-201ENST00000296271 SAR1BQ9Y6B6 198 aa13□□□□□ -0.33
RHO-201ENST00000296271 H3BQF6 201 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 N4BP1O75113 896 aaKnown RBP12.99□□□□□ -0.33
RHO-201ENST00000296271 C2orf54Q08AI8 447 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 KCNH2Q12809 1159 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 KIF5AQ12840 1032 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 TBC1D10BQ4KMP7 808 aaPredicted RBP12.99□□□□□ -0.33
RHO-201ENST00000296271 HAUS3Q68CZ6 603 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 NFRKBQ6P4R8 1299 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 OTOP1Q7RTM1 612 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 CCDC170Q8IYT3 715 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 OGFOD1Q8N543 542 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 FAM133AQ8N9E0 248 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 PLEKHA4Q9H4M7 779 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 MYO1AQ9UBC5 1043 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 NFIBO00712 420 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 IPO7O95373 1038 aaKnown RBP12.99□□□□□ -0.33
RHO-201ENST00000296271 GCNT3O95395 438 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 HNRNPH3P31942 346 aaKnown RBP12.99□□□□□ -0.33
RHO-201ENST00000296271 CIITAP33076 1130 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 CXCL9Q07325 125 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 RAPGEF1Q13905 1077 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 PLS1Q14651 629 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 SPA17Q15506 151 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 TERF2Q15554 542 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 ASTE1Q2TB18 679 aaPredicted RBP12.99□□□□□ -0.33
RHO-201ENST00000296271 DCAF17Q5H9S7 520 aaPredicted RBP12.99□□□□□ -0.33
RHO-201ENST00000296271 BEND6Q5SZJ8 279 aaPredicted RBP12.99□□□□□ -0.33
RHO-201ENST00000296271 LRCH2Q5VUJ6 765 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 RINT1Q6NUQ1 792 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 CPXCR1Q8N123 301 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 BANK1Q8NDB2 785 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 SECISBP2LQ93073 1101 aaKnown RBP12.99□□□□□ -0.33
RHO-201ENST00000296271 GLT8D2Q9H1C3 349 aa12.99□□□□□ -0.33
RHO-201ENST00000296271 HERC5Q9UII4 1024 aaKnown RBP12.99□□□□□ -0.33
RHO-201ENST00000296271 TMEM150BA6NC51 233 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 WNT10BO00744 389 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 WHAMMP3Q1A5X7 153 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 PAPD7Q5XG87 772 aaKnown RBP12.98□□□□□ -0.33
RHO-201ENST00000296271 MOXD1Q6UVY6 613 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 LDHDQ86WU2 507 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 HSD17B14Q9BPX1 270 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 SH2D4AQ9H788 454 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 RABGAP1Q9Y3P9 1069 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 PCDHB13Q9Y5F0 798 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 ASTN1O14525 1302 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 PSMD10O75832 226 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 FGFR1OPO95684 399 aaKnown RBP12.98□□□□□ -0.33
RHO-201ENST00000296271 FOSP01100 380 aaPredicted RBP12.98□□□□□ -0.33
RHO-201ENST00000296271 MAGEA1P43355 309 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 KNOP1Q1ED39 458 aaKnown RBP12.98□□□□□ -0.33
RHO-201ENST00000296271 TCERG1LQ5VWI1 586 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 MSANTD4Q8NCY6 345 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 HDAC7Q8WUI4 952 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 NAP1L4Q99733 375 aaKnown RBP12.98□□□□□ -0.33
RHO-201ENST00000296271 UNC45AQ9H3U1 944 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 GOLPH3Q9H4A6 298 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 VCPKMTQ9H867 229 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
RHO-201ENST00000296271 PACSIN2Q9UNF0 486 aaPredicted RBP12.98□□□□□ -0.33
RHO-201ENST00000296271 GCOM1H8Y6P7 765 aaPredicted RBP12.97□□□□□ -0.33
RHO-201ENST00000296271 POLR2MP0CAP2 368 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 MYBL2P10244 700 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 OAS2P29728 719 aaKnown RBP12.97□□□□□ -0.33
RHO-201ENST00000296271 CAP2P40123 477 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 MATR3P43243 847 aaKnown RBP eCLIP12.97□□□□□ -0.33
RHO-201ENST00000296271 PRAMEF18Q5VWM3 479 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 DPY19L2P1Q6NXN4 242 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 EPM2AIP1Q7L775 607 aaPredicted RBP12.97□□□□□ -0.33
RHO-201ENST00000296271 SUPT20HQ8NEM7 779 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 ERMNQ8TAM6 284 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 FAM20AQ96MK3 541 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 ZNF341Q9BYN7 854 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 ADAMTS1Q9UHI8 967 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 PGAP2Q9UHJ9 254 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 A0A087X0T9 212 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 TISP43B9A030 160 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 TBX3O15119 743 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 FAM228BP0C875 321 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 CDK17Q00537 523 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 ZNF771Q7L3S4 317 aaPredicted RBP12.97□□□□□ -0.33
RHO-201ENST00000296271 MS4A14Q96JA4 679 aa12.97□□□□□ -0.33
RHO-201ENST00000296271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms