RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 TRIM47Q96LD4 638 aa25.4■■□□□ 1.66
PTX3-201ENST00000295927 ZSWIM4Q9H7M6 989 aa25.4■■□□□ 1.66
PTX3-201ENST00000295927 INTS13Q9NVM9 706 aa25.4■■□□□ 1.66
PTX3-201ENST00000295927 TCEAL9Q9UHQ7 104 aa25.4■■□□□ 1.66
PTX3-201ENST00000295927 PCDHA2Q9Y5H9 948 aa25.4■■□□□ 1.66
PTX3-201ENST00000295927 ZNFX1Q9P2E3 1918 aaKnown RBP25.4■■□□□ 1.66
PTX3-201ENST00000295927 WDR81Q562E7 1941 aa25.4■■□□□ 1.66
PTX3-201ENST00000295927 BICDL2A1A5D9 508 aa25.39■■□□□ 1.66
PTX3-201ENST00000295927 SPATA31C2B4DYI2 1134 aa25.39■■□□□ 1.66
PTX3-201ENST00000295927 ZBTB48P10074 688 aaPredicted RBP25.39■■□□□ 1.66
PTX3-201ENST00000295927 SFNP31947 248 aa25.39■■□□□ 1.66
PTX3-201ENST00000295927 LRRC41Q15345 812 aa25.39■■□□□ 1.66
PTX3-201ENST00000295927 ANKRD40Q6AI12 368 aa25.39■■□□□ 1.66
PTX3-201ENST00000295927 APTXQ7Z2E3 356 aaKnown RBP25.39■■□□□ 1.66
PTX3-201ENST00000295927 ANKRD23Q86SG2 305 aa25.39■■□□□ 1.66
PTX3-201ENST00000295927 SMCR8Q8TEV9 937 aaPredicted RBP25.39■■□□□ 1.66
PTX3-201ENST00000295927 DUSP9Q99956 384 aaKnown RBP25.39■■□□□ 1.66
PTX3-201ENST00000295927 ZHX3Q9H4I2 956 aa25.39■■□□□ 1.66
PTX3-201ENST00000295927 MROH8Q9H579 483 aa25.39■■□□□ 1.66
PTX3-201ENST00000295927 WDR64B1ANS9 1081 aa25.39■■□□□ 1.65
PTX3-201ENST00000295927 QARSP47897 775 aaKnown RBP25.39■■□□□ 1.65
PTX3-201ENST00000295927 ZNF746Q6NUN9 644 aaPredicted RBP25.39■■□□□ 1.65
PTX3-201ENST00000295927 TMC6Q7Z403 805 aa25.39■■□□□ 1.65
PTX3-201ENST00000295927 FILIP1Q7Z7B0 1213 aa25.39■■□□□ 1.65
PTX3-201ENST00000295927 SEMA6BQ9H3T3 888 aa25.39■■□□□ 1.65
PTX3-201ENST00000295927 TBC1D7Q9P0N9 293 aa25.39■■□□□ 1.65
PTX3-201ENST00000295927 EDNRBP24530 442 aa25.38■■□□□ 1.65
PTX3-201ENST00000295927 CENPPQ6IPU0 288 aa25.38■■□□□ 1.65
PTX3-201ENST00000295927 C1orf186Q6ZWK4 172 aa25.38■■□□□ 1.65
PTX3-201ENST00000295927 MMP19Q99542 508 aa25.38■■□□□ 1.65
PTX3-201ENST00000295927 SENP7Q9BQF6 1050 aa25.38■■□□□ 1.65
PTX3-201ENST00000295927 NFASCO94856 1347 aa25.38■■□□□ 1.65
PTX3-201ENST00000295927 LRRC37A2A6NM11 1700 aa25.38■■□□□ 1.65
PTX3-201ENST00000295927 SHCBP1Q8NEM2 672 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 SRRTQ9BXP5 876 aaKnown RBP25.37■■□□□ 1.65
PTX3-201ENST00000295927 FGFBP2Q9BYJ0 223 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 KCNF1Q9H3M0 494 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 BCAS3Q9H6U6 928 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 IMPACTQ9P2X3 320 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 A0A1B0GTH6 734 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 PGK2P07205 417 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 ICAM3P32942 547 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 SPAG1Q07617 926 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 KCTD2Q14681 263 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 WDR78Q5VTH9 848 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 IRF2BP1Q8IU81 584 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 MYOCDQ8IZQ8 938 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 RDM1Q8NG50 284 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 THAP9Q9H5L6 903 aa25.37■■□□□ 1.65
PTX3-201ENST00000295927 LIMA1Q9UHB6 759 aaKnown RBP25.37■■□□□ 1.65
PTX3-201ENST00000295927 RSPH10B2B2RC85 870 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 KCNJ18B7U540 433 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 LYPLA2O95372 231 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 RSPH10BP0C881 870 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 HUNKP57058 714 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 KCNJ12Q14500 433 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 NR1I3Q14994 352 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 TCP11X2Q5H9J9 407 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 FAM43AQ8N2R8 423 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 CSGALNACT2Q8N6G5 542 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 GPRC5AQ8NFJ5 357 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 NOC3LQ8WTT2 800 aaKnown RBP25.36■■□□□ 1.65
PTX3-201ENST00000295927 CTAGE1Q96RT6 745 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 PORCNQ9H237 461 aa25.36■■□□□ 1.65
PTX3-201ENST00000295927 DNAJC25-GNG10A0A024R161 153 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 MSNP26038 577 aaKnown RBP25.35■■□□□ 1.65
PTX3-201ENST00000295927 KRT31Q15323 416 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 UGCGQ16739 394 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 VSTM4Q8IW00 320 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 PCDHA10Q9Y5I2 948 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 ARHGEF35A5YM69 484 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 TBCAO75347 108 aaKnown RBP25.35■■□□□ 1.65
PTX3-201ENST00000295927 SP2Q02086 613 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 PTPN21Q16825 1174 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 SEPT14Q6ZU15 432 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 SFR1Q86XK3 245 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 FGD4Q96M96 766 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 EFCC1Q9HA90 598 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 POLD4Q9HCU8 107 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 JPH1Q9HDC5 661 aaPredicted RBP25.35■■□□□ 1.65
PTX3-201ENST00000295927 KCND2Q9NZV8 630 aa25.35■■□□□ 1.65
PTX3-201ENST00000295927 LRRC10BA6NIK2 292 aa25.34■■□□□ 1.65
PTX3-201ENST00000295927 PSMC5P62195 406 aa25.34■■□□□ 1.65
PTX3-201ENST00000295927 C4orf19Q8IY42 314 aa25.34■■□□□ 1.65
PTX3-201ENST00000295927 SMAP1Q8IYB5 467 aaPredicted RBP25.34■■□□□ 1.65
PTX3-201ENST00000295927 ANKRD13CQ8N6S4 541 aa25.34■■□□□ 1.65
PTX3-201ENST00000295927 PTPN18Q99952 460 aa25.34■■□□□ 1.65
PTX3-201ENST00000295927 SLC9A2Q9UBY0 812 aa25.34■■□□□ 1.65
PTX3-201ENST00000295927 DBR1Q9UK59 544 aaKnown RBP25.34■■□□□ 1.65
PTX3-201ENST00000295927 COL4A3BPQ9Y5P4 624 aa25.34■■□□□ 1.65
PTX3-201ENST00000295927 ANKRD20A12PQ8NF67 263 aa25.33■■□□□ 1.65
PTX3-201ENST00000295927 RRAGDQ9NQL2 400 aaPredicted RBP25.33■■□□□ 1.65
PTX3-201ENST00000295927 MYH11P35749 1972 aa25.33■■□□□ 1.65
PTX3-201ENST00000295927 B4DLN1 442 aa25.33■■□□□ 1.65
PTX3-201ENST00000295927 GCLCP48506 637 aaPredicted RBP25.33■■□□□ 1.65
PTX3-201ENST00000295927 CCNA1P78396 465 aa25.33■■□□□ 1.65
PTX3-201ENST00000295927 ARID5BQ14865 1188 aa25.33■■□□□ 1.65
PTX3-201ENST00000295927 FILIP1LQ4L180 1135 aa25.33■■□□□ 1.65
PTX3-201ENST00000295927 CREBRFQ8IUR6 639 aa25.33■■□□□ 1.65
PTX3-201ENST00000295927 CACTINQ8WUQ7 758 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms