RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 SPATA31C2B4DYI2 1134 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 GCOM1H8Y6P7 765 aaPredicted RBP12.06□□□□□ -0.48
USP41-201ENST00000292729 ZBTB5O15062 677 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 FIBPO43427 364 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 POLR2MP0CAP2 368 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 HOXA13P31271 388 aaPredicted RBP12.06□□□□□ -0.48
USP41-201ENST00000292729 DUSP6Q16828 381 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 UTP14CQ5TAP6 766 aaKnown RBP12.06□□□□□ -0.48
USP41-201ENST00000292729 TMEM184AQ6ZMB5 413 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 TBC1D10CQ8IV04 446 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 NKD2Q969F2 451 aaPredicted RBP12.06□□□□□ -0.48
USP41-201ENST00000292729 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 INPP4AQ96PE3 977 aaPredicted RBP12.06□□□□□ -0.48
USP41-201ENST00000292729 SENP7Q9BQF6 1050 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 BCAS3Q9H6U6 928 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 AAASQ9NRG9 546 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
USP41-201ENST00000292729 NR2E1Q9Y466 385 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 PCDHB12Q9Y5F1 795 aa12.06□□□□□ -0.48
USP41-201ENST00000292729 ZNF213O14771 459 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 PDGFBP01127 241 aaPredicted RBP12.05□□□□□ -0.48
USP41-201ENST00000292729 MFAP1P55081 439 aaKnown RBP12.05□□□□□ -0.48
USP41-201ENST00000292729 MTMR3Q13615 1198 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 IER5Q5VY09 327 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 RUFY4Q6ZNE9 571 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 TRIM50Q86XT4 487 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 GIMAP8Q8ND71 665 aaPredicted RBP12.05□□□□□ -0.48
USP41-201ENST00000292729 RASGRP4Q8TDF6 673 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 OTUD7AQ8TE49 926 aaPredicted RBP12.05□□□□□ -0.48
USP41-201ENST00000292729 FAM227BQ96M60 508 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 ZSCAN10Q96SZ4 725 aaPredicted RBP12.05□□□□□ -0.48
USP41-201ENST00000292729 TUBE1Q9UJT0 475 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 SORCS3Q9UPU3 1222 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 CDY2AQ9Y6F7 541 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 NEDD4P46934 1319 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 FRMPD4Q14CM0 1322 aa12.05□□□□□ -0.48
USP41-201ENST00000292729 A0A0D9SFI3 127 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 MBLAC1A4D2B0 266 aaPredicted RBP12.04□□□□□ -0.48
USP41-201ENST00000292729 KLRF2D3W0D1 207 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 PER2O15055 1255 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 SCG2P13521 617 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 HOXB8P17481 243 aaPredicted RBP12.04□□□□□ -0.48
USP41-201ENST00000292729 MRPS6P82932 125 aaKnown RBP12.04□□□□□ -0.48
USP41-201ENST00000292729 MRPS9P82933 396 aaKnown RBP12.04□□□□□ -0.48
USP41-201ENST00000292729 PPFIA1Q13136 1202 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 PAN2Q504Q3 1202 aaKnown RBP12.04□□□□□ -0.48
USP41-201ENST00000292729 ANKRD54Q6NXT1 300 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 RTN4RL1Q86UN2 441 aaPredicted RBP12.04□□□□□ -0.48
USP41-201ENST00000292729 FCHSD1Q86WN1 690 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 ENAHQ8N8S7 591 aaPredicted RBP12.04□□□□□ -0.48
USP41-201ENST00000292729 KREMEN2Q8NCW0 462 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 DNAJB3Q8WWF6 145 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 LINC01599Q8WXQ3 324 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 ZFP91Q96JP5 570 aaPredicted RBP12.04□□□□□ -0.48
USP41-201ENST00000292729 S1PR5Q9H228 398 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 AGO3Q9H9G7 860 aaKnown RBP12.04□□□□□ -0.48
USP41-201ENST00000292729 ERAP1Q9NZ08 941 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 LRFN2Q9ULH4 789 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 SALL3Q9BXA9 1300 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 DCHS1Q96JQ0 3298 aa12.04□□□□□ -0.48
USP41-201ENST00000292729 M0QZ92 97 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 PPP1R11O60927 126 aaPredicted RBP12.03□□□□□ -0.48
USP41-201ENST00000292729 PPFIA3O75145 1194 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 CD52P31358 61 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 TECP42680 631 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 CLCN5P51795 746 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 SEMA3FQ13275 785 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 KCNC3Q14003 757 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 GRIK4Q16099 956 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 SPOUT1Q5T280 376 aaKnown RBP12.03□□□□□ -0.48
USP41-201ENST00000292729 ASTLQ6HA08 431 aaPredicted RBP12.03□□□□□ -0.48
USP41-201ENST00000292729 XRRA1Q6P2D8 792 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 ZNF589Q86UQ0 364 aaPredicted RBP12.03□□□□□ -0.48
USP41-201ENST00000292729 ADSSL1Q8N142 457 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 TMEM105Q8N8V8 129 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 VN1R2Q8NFZ6 395 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 TNPO1Q92973 898 aaKnown RBP12.03□□□□□ -0.48
USP41-201ENST00000292729 NECTIN4Q96NY8 510 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
USP41-201ENST00000292729 LZTS1Q9Y250 596 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 SUPT16HQ9Y5B9 1047 aaKnown RBP12.03□□□□□ -0.48
USP41-201ENST00000292729 PCDHGC5Q9Y5F6 944 aa12.03□□□□□ -0.48
USP41-201ENST00000292729 BAZ2BQ9UIF8 2168 aaKnown RBP12.03□□□□□ -0.48
USP41-201ENST00000292729 GVINP1Q7Z2Y8 2422 aa12.02□□□□□ -0.48
USP41-201ENST00000292729 RRN3P2A6NIE6 340 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 FSCN2O14926 492 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 FGF18O76093 207 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 TCF7P36402 384 aaPredicted RBP12.02□□□□□ -0.49
USP41-201ENST00000292729 PAK2Q13177 524 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 C20orf194Q5TEA3 1177 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 FRMD5Q7Z6J6 570 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 NLRX1Q86UT6 975 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 STAG2Q8N3U4 1231 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 ZSWIM5Q9P217 1185 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 PADI3Q9ULW8 664 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 PCDHB7Q9Y5E2 793 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 TRPV2Q9Y5S1 764 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 DMDP11532 3685 aa12.02□□□□□ -0.49
USP41-201ENST00000292729 B4E1Z4 1266 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms