RNA–Protein interactions for RNA: ENST00000291281.8

PRKD2-201, Transcript of protein kinase D2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD2, Length 3,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-201ENST00000291281 PNMA5Q96PV4 448 aa16.83■□□□□ 0.29
PRKD2-201ENST00000291281 NLRC4Q9NPP4 1024 aa16.83■□□□□ 0.29
PRKD2-201ENST00000291281 BTAF1O14981 1849 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 FKBP3Q00688 224 aaKnown RBP16.83■□□□□ 0.28
PRKD2-201ENST00000291281 IFT88Q13099 833 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 RUFY4Q6ZNE9 571 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 TGFBRAP1Q8WUH2 860 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 CDK5RAP3Q96JB5 506 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 GGA1Q9UJY5 639 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 SMCO2A6NFE2 343 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 DOK7Q18PE1 504 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 ZCWPW2Q504Y3 356 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 AP1ARQ63HQ0 302 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 MAPKAPK5Q8IW41 473 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 RAD54LQ92698 747 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 RBM17Q96I25 401 aaKnown RBP16.83■□□□□ 0.28
PRKD2-201ENST00000291281 MTMR9Q96QG7 549 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 MXD3Q9BW11 206 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 POLD4Q9HCU8 107 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 SLC12A6Q9UHW9 1150 aa16.83■□□□□ 0.28
PRKD2-201ENST00000291281 GOLGA6L7A0A1B0GV03 622 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 BHMG1C9JSJ3 638 aaPredicted RBP16.82■□□□□ 0.28
PRKD2-201ENST00000291281 H0YGN5 161 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 ECHS1P30084 290 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 HSD17B3P37058 310 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 TMEM266Q2M3C6 531 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 CCDC121Q6ZUS5 278 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 DYMQ7RTS9 669 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 SH3RF3Q8TEJ3 882 aaPredicted RBP16.82■□□□□ 0.28
PRKD2-201ENST00000291281 TBC1D5Q92609 795 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 PBKQ96KB5 322 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 JPH2Q9BR39 696 aaPredicted RBP16.82■□□□□ 0.28
PRKD2-201ENST00000291281 NFS1Q9Y697 457 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 GMNCA6NCL1 334 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 GNA14O95837 355 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 MMP10P09238 476 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 RDXP35241 583 aaKnown RBP16.82■□□□□ 0.28
PRKD2-201ENST00000291281 ERVK-9P63128 1117 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 KIAA0753Q2KHM9 967 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 C10orf76Q5T2E6 689 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 ARMC9Q7Z3E5 817 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 MYOCDQ8IZQ8 938 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 TBCKQ8TEA7 893 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 THOC1Q96FV9 657 aaKnown RBP16.82■□□□□ 0.28
PRKD2-201ENST00000291281 CEP63Q96MT8 703 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 LSM14BQ9BX40 385 aaKnown RBP16.82■□□□□ 0.28
PRKD2-201ENST00000291281 RAB34Q9BZG1 259 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 AIPL1Q9NZN9 384 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 POLLQ9UGP5 575 aa16.82■□□□□ 0.28
PRKD2-201ENST00000291281 KLRF2D3W0D1 207 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 G3V3G9 751 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 DNA2P51530 1060 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 HLTFQ14527 1009 aaKnown RBP eCLIP16.81■□□□□ 0.28
PRKD2-201ENST00000291281 SEPT2Q15019 361 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 DCAF8Q5TAQ9 597 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 SOGA3Q5TF21 947 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 ZNF804AQ7Z570 1209 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 SLC44A5Q8NCS7 719 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 ACTRT1Q8TDG2 376 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 ZKSCAN4Q969J2 545 aaPredicted RBP16.81■□□□□ 0.28
PRKD2-201ENST00000291281 TMEM47Q9BQJ4 181 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 MKNK2Q9HBH9 465 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 CCDC88AQ3V6T2 1871 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 ESYT2A0FGR8 921 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 USP17L3A6NCW0 530 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 USP17L4A6NCW7 530 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 TRAPPC3O43617 180 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 PAEPP09466 180 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 HPDP32754 393 aaPredicted RBP16.81■□□□□ 0.28
PRKD2-201ENST00000291281 TXKP42681 527 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 POLR2FP61218 127 aaKnown RBP16.81■□□□□ 0.28
PRKD2-201ENST00000291281 MTMR3Q13615 1198 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 RPS6KA1Q15418 735 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 TRADDQ15628 312 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 CALCRLQ16602 461 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 SLC27A3Q5K4L6 730 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 AGBL2Q5U5Z8 902 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 USP17L1Q7RTZ2 530 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 SCFD2Q8WU76 684 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
PRKD2-201ENST00000291281 ADRA2BP18089 450 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 CDR1P51861 262 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 MARSP56192 900 aaKnown RBP16.81■□□□□ 0.28
PRKD2-201ENST00000291281 GTF2IP78347 998 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 PDIA5Q14554 519 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 IFI16Q16666 785 aaKnown RBP16.81■□□□□ 0.28
PRKD2-201ENST00000291281 PREPLQ4J6C6 727 aaPredicted RBP16.81■□□□□ 0.28
PRKD2-201ENST00000291281 KLHL7Q8IXQ5 586 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 DDX12PQ92771 950 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 MIEF2Q96C03 454 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 SLC40A1Q9NP59 571 aa16.81■□□□□ 0.28
PRKD2-201ENST00000291281 PPANQ9NQ55 473 aaKnown RBP16.81■□□□□ 0.28
PRKD2-201ENST00000291281 A0A087X0T9 212 aa16.8■□□□□ 0.28
PRKD2-201ENST00000291281 FAM228BP0C875 321 aa16.8■□□□□ 0.28
PRKD2-201ENST00000291281 SMARCA1P28370 1054 aa16.8■□□□□ 0.28
PRKD2-201ENST00000291281 USP11P51784 963 aa16.8■□□□□ 0.28
PRKD2-201ENST00000291281 ZNF844Q08AG5 666 aa16.8■□□□□ 0.28
PRKD2-201ENST00000291281 TMEM119Q4V9L6 283 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms