RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 WDR11Q9BZH6 1224 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 EPB41L5Q9HCM4 733 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 VCX3AQ9NNX9 186 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 RNF146Q9NTX7 359 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 INTS9Q9NV88 658 aaKnown RBP12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 MRFAP1Q9Y605 127 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 GSG1L2A8MUP6 293 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 SUN1O94901 812 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 KRT15P19012 456 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 ODR4Q5SWX8 454 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 TRIML1Q8N9V2 468 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 SREK1Q8WXA9 508 aaKnown RBP12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 RTEL1Q9NZ71 1219 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 PCDHA4Q9UN74 947 aa12.38□□□□□ -0.43
NPC1L1-201ENST00000289547 BAG2O95816 211 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 PDIA3P30101 505 aaKnown RBP12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 MORC3Q14149 939 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 PTPROQ16827 1216 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 CMTR1Q8N1G2 835 aaKnown RBP12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 IWS1Q96ST2 819 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 RAVER2Q9HCJ3 691 aaKnown RBP12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 NYAP2Q9P242 653 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 PCDHA12Q9UN75 941 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 KRIT1O00522 736 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 ZBTB5O15062 677 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 SLC25A27O95847 323 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 MYCP01106 439 aaPredicted RBP12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 PSMC4P43686 418 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 C2orf54Q08AI8 447 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 TFDP1Q14186 410 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 PRAMEF18Q5VWM3 479 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 TBC1D1Q86TI0 1168 aaPredicted RBP12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 DEPTORQ8TB45 409 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 TSNARE1Q96NA8 513 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 LMO7Q8WWI1 1683 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 HEXIM1O94992 359 aaKnown RBP12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 GNAT1P11488 350 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 AP3B2Q13367 1082 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 CNNM4Q6P4Q7 775 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 SDCCAG8Q86SQ7 713 aaPredicted RBP12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 CCDC105Q8IYK2 499 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 NSUN6Q8TEA1 469 aaKnown RBP12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 SPDL1Q96EA4 605 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 KRT12Q99456 494 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 ZNF577Q9BSK1 485 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 RCAN1P53805 252 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 FNBP1Q96RU3 617 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 LARSQ9P2J5 1176 aaKnown RBP12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 WDR19Q8NEZ3 1342 aa12.37□□□□□ -0.43
NPC1L1-201ENST00000289547 FBXW10Q5XX13 1052 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 PPP1R18Q6NYC8 613 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 SLC44A5Q8NCS7 719 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 ZC3H15Q8WU90 426 aaKnown RBP12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 NOP53Q9NZM5 478 aaKnown RBP12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 FRMD4BQ9Y2L6 1034 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 PRPF3O43395 683 aaKnown RBP12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 AKR1B1P15121 316 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 TNFAIP3P21580 790 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 SFMBT2Q5VUG0 894 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 IRAK4Q9NWZ3 460 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 GPRC5DQ9NZD1 345 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 KLRK1P26718 216 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 SCRN1Q12765 414 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 INF2Q27J81 1249 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 XKR9Q5GH70 373 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 C15orf52Q6ZUT6 534 aaKnown RBP12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 GPRC5AQ8NFJ5 357 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 TOPAZ1Q8N9V7 1692 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 TADA3O75528 432 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 TTLL4Q14679 1199 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 MAP7D1Q3KQU3 841 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 CABP7Q86V35 215 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 KSR1Q8IVT5 923 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 GSDMBQ8TAX9 411 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 ADPGKQ9BRR6 497 aa12.36□□□□□ -0.43
NPC1L1-201ENST00000289547 LAD1O00515 517 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 VIL1P09327 827 aaKnown RBP12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 TRAPPC10P48553 1259 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 ALS2CLQ60I27 953 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 NOSTRINQ8IVI9 506 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 UBL4BQ8N7F7 174 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 FAF1Q9UNN5 650 aaPredicted RBP12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 SOCS7O14512 581 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 OR52Z1P0C646 297 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 FGFR2P21802 821 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 GGCXP38435 758 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 GCLCP48506 637 aaPredicted RBP12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 CRY2Q49AN0 593 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 CFAP157Q5JU67 520 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 ABTB1Q969K4 478 aaPredicted RBP12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 SCOCQ9UIL1 159 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms