RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 POLR2BP30876 1174 aaKnown RBP18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 MSH2P43246 934 aa18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 GEN1Q17RS7 908 aa18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 TPH2Q8IWU9 490 aa18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 SYT2Q8N9I0 419 aaPredicted RBP18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 MXD3Q9BW11 206 aa18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 DHX36Q9H2U1 1008 aaKnown RBP18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 SLC24A3Q9HC58 644 aa18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 VSNL1P62760 191 aa18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 MYO1EQ12965 1108 aa18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 PRR16Q569H4 304 aa18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 MB21D2Q8IYB1 491 aaPredicted RBP18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 SMCR8Q8TEV9 937 aaPredicted RBP18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 DCPSQ96C86 337 aaKnown RBP18.9■□□□□ 0.62
PCDHA13-201ENST00000289272 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 DDX39AO00148 427 aaKnown RBP18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 TTI1O43156 1089 aa18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 HSPA8P11142 646 aaKnown RBP18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 PSMC2P35998 433 aaKnown RBP18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 PHEXP78562 749 aa18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 PSMD6Q15008 389 aa18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 KRT39Q6A163 491 aa18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 TBC1D10CQ8IV04 446 aa18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 TRIM55Q9BYV6 548 aa18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 ZNF408Q9H9D4 720 aa18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 HAUS2Q9NVX0 235 aa18.89■□□□□ 0.62
PCDHA13-201ENST00000289272 TNS3Q68CZ2 1445 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 CA8P35219 290 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 PSMD7P51665 324 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 MRPS35P82673 323 aaKnown RBP18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 MAEAQ7L5Y9 396 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 RASGRP4Q8TDF6 673 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 HPCAL4Q9UM19 191 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 PRDM4Q9UKN5 801 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 DIP2CQ9Y2E4 1556 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 PALLDQ8WX93 1383 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 ABCB5Q2M3G0 1257 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 C1orf112Q9NSG2 853 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 CDHR2Q9BYE9 1310 aa18.89■□□□□ 0.61
PCDHA13-201ENST00000289272 IQANK1A0A1B0GTG1 560 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 FTCDO95954 541 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 BYSLQ13895 437 aaKnown RBP18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 BEND6Q5SZJ8 279 aaPredicted RBP18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 SUSD4Q5VX71 490 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 SULF1Q8IWU6 871 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 CSRNP1Q96S65 589 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 ZNF148Q9UQR1 794 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 P4HA1P13674 534 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 SLC7A5Q01650 507 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 SLFN13Q68D06 897 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 ZNF449Q6P9G9 518 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 AGGF1Q8N302 714 aaeCLIP18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 ADRA2BP18089 450 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 MYL7Q01449 175 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 MYO1FO00160 1098 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 COBLO75128 1261 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 AP2B1P63010 937 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 TMED2Q15363 201 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 PTPN21Q16825 1174 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 ECT2Q9H8V3 914 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 GJB4Q9NTQ9 266 aa18.88■□□□□ 0.61
PCDHA13-201ENST00000289272 TMED1Q13445 227 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 HLFQ16534 295 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 RABL6Q3YEC7 729 aaPredicted RBP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 ZC3H18Q86VM9 953 aaKnown RBP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 KIAA0825Q8IV33 1275 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 OVOS2A0A0G2JMS6 1433 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 SPECC1L-ADORA2AF8WAN1 911 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 NPR1P16066 1061 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 SLC12A2P55011 1212 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 SF3A3Q12874 501 aaKnown RBP eCLIP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 BRIP1Q9BX63 1249 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 IFT122Q9HBG6 1241 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 TRPC6Q9Y210 931 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 ZNF335Q9H4Z2 1342 aaPredicted RBP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 PLEKHG2Q9H7P9 1386 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 CPS1P31327 1500 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 AGTP01019 485 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 MT-ND3P03897 115 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 NSFP46459 744 aaKnown RBP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 DHX34Q14147 1143 aaKnown RBP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 CCNI2Q6ZMN8 369 aaPredicted RBP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 DPH6Q7L8W6 267 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 SUGP1Q8IWZ8 645 aaKnown RBP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 ABTB1Q969K4 478 aaPredicted RBP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 BEGAINQ9BUH8 593 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 TRIM66O15016 1216 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 RPS6KA4O75676 772 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 MAGOHP61326 146 aaKnown RBP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 TEDDM1Q5T9Z0 273 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 ARHGEF16Q5VV41 709 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 A0A1B0GTH6 734 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 EXOC1LA0A1B0GW35 172 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 PMS2P54278 862 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 ACTN3Q08043 901 aaPredicted RBP18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 GRAPQ13588 217 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 CUL3Q13618 768 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 CATSPER1Q8NEC5 780 aa18.87■□□□□ 0.61
PCDHA13-201ENST00000289272 GRAPLQ8TC17 118 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms