RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 HOXC8P31273 242 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 TMEM240Q5SV17 173 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 ZNF365Q70YC5 407 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 PLPPR4Q7Z2D5 763 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 DEFB128Q7Z7B8 93 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 SERINC5Q86VE9 423 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 SMAP1Q8IYB5 467 aaPredicted RBP28.44■■■□□ 2.14
PDF-201ENST00000288022 LMBR1Q8WVP7 490 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 SLC5A5Q92911 643 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 GJA10Q969M2 543 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 MBOAT7Q96N66 472 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 RIT2Q99578 217 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 NAP1L4Q99733 375 aaKnown RBP28.44■■■□□ 2.14
PDF-201ENST00000288022 TEKT3Q9BXF9 490 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 ZNF302Q9NR11 478 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 TANC1Q9C0D5 1861 aa28.44■■■□□ 2.14
PDF-201ENST00000288022 SOX1O00570 391 aaPredicted RBP28.43■■■□□ 2.14
PDF-201ENST00000288022 CKBP12277 381 aa28.43■■■□□ 2.14
PDF-201ENST00000288022 SELPP16109 830 aa28.43■■■□□ 2.14
PDF-201ENST00000288022 GCFC2P16383 781 aaKnown RBP28.43■■■□□ 2.14
PDF-201ENST00000288022 SWSAP1Q6NVH7 229 aa28.43■■■□□ 2.14
PDF-201ENST00000288022 LRRC8DQ7L1W4 858 aa28.43■■■□□ 2.14
PDF-201ENST00000288022 TNPO1Q92973 898 aaKnown RBP28.43■■■□□ 2.14
PDF-201ENST00000288022 TNFRSF25Q93038 417 aa28.43■■■□□ 2.14
PDF-201ENST00000288022 WNT8BQ93098 351 aa28.43■■■□□ 2.14
PDF-201ENST00000288022 TRIP12Q14669 1992 aaPredicted RBP28.42■■■□□ 2.14
PDF-201ENST00000288022 CHMP2AO43633 222 aa28.42■■■□□ 2.14
PDF-201ENST00000288022 SLC37A4O43826 429 aa28.42■■■□□ 2.14
PDF-201ENST00000288022 FGBP02675 491 aa28.42■■■□□ 2.14
PDF-201ENST00000288022 PSAPP07602 524 aa28.42■■■□□ 2.14
PDF-201ENST00000288022 RFC2P35250 354 aa28.42■■■□□ 2.14
PDF-201ENST00000288022 THPOP40225 353 aa28.42■■■□□ 2.14
PDF-201ENST00000288022 IGBP1P78318 339 aa28.42■■■□□ 2.14
PDF-201ENST00000288022 PLCB4Q15147 1175 aa28.42■■■□□ 2.14
PDF-201ENST00000288022 GRIK4Q16099 956 aa28.42■■■□□ 2.14
PDF-201ENST00000288022 CCDC60Q8IWA6 550 aaPredicted RBP28.42■■■□□ 2.14
PDF-201ENST00000288022 PCDHA10Q9Y5I2 948 aa28.42■■■□□ 2.14
PDF-201ENST00000288022 IGKV6D-21A0A0A0MT36 114 aa28.41■■■□□ 2.14
PDF-201ENST00000288022 WDR64B1ANS9 1081 aa28.41■■■□□ 2.14
PDF-201ENST00000288022 SLC26A2P50443 739 aa28.41■■■□□ 2.14
PDF-201ENST00000288022 RBL2Q08999 1139 aa28.41■■■□□ 2.14
PDF-201ENST00000288022 TRIM71Q2Q1W2 868 aaKnown RBP28.41■■■□□ 2.14
PDF-201ENST00000288022 PPP4R3AQ6IN85 833 aa28.41■■■□□ 2.14
PDF-201ENST00000288022 PDXDC2PQ6P474 469 aa28.41■■■□□ 2.14
PDF-201ENST00000288022 CKAP2LQ8IYA6 745 aa28.41■■■□□ 2.14
PDF-201ENST00000288022 LRCH3Q96II8 777 aa28.41■■■□□ 2.14
PDF-201ENST00000288022 POTEB3A0JP26 581 aa28.4■■■□□ 2.14
PDF-201ENST00000288022 MARCH6O60337 910 aa28.4■■■□□ 2.14
PDF-201ENST00000288022 INSRRP14616 1297 aa28.4■■■□□ 2.14
PDF-201ENST00000288022 ZNF618Q5T7W0 954 aa28.4■■■□□ 2.14
PDF-201ENST00000288022 POTEBQ6S5H4 581 aa28.4■■■□□ 2.14
PDF-201ENST00000288022 ETNPPLQ8TBG4 499 aa28.4■■■□□ 2.14
PDF-201ENST00000288022 FTOQ9C0B1 505 aaKnown RBP eCLIP28.4■■■□□ 2.14
PDF-201ENST00000288022 UNC45AQ9H3U1 944 aa28.4■■■□□ 2.14
PDF-201ENST00000288022 KIF3AQ9Y496 699 aa28.4■■■□□ 2.14
PDF-201ENST00000288022 RANBP2P49792 3224 aaKnown RBP28.4■■■□□ 2.14
PDF-201ENST00000288022 SCN5AQ14524 2016 aa28.4■■■□□ 2.14
PDF-201ENST00000288022 RRN3P2A6NIE6 340 aa28.39■■■□□ 2.14
PDF-201ENST00000288022 PSMD10O75832 226 aa28.39■■■□□ 2.14
PDF-201ENST00000288022 PFKMP08237 780 aa28.39■■■□□ 2.14
PDF-201ENST00000288022 ADAM17P78536 824 aa28.39■■■□□ 2.14
PDF-201ENST00000288022 GNL2Q13823 731 aaKnown RBP28.39■■■□□ 2.14
PDF-201ENST00000288022 OTOP2Q7RTS6 562 aa28.39■■■□□ 2.14
PDF-201ENST00000288022 KAT6AQ92794 2004 aa28.39■■■□□ 2.14
PDF-201ENST00000288022 MTIF3Q9H2K0 278 aaKnown RBP28.39■■■□□ 2.14
PDF-201ENST00000288022 DISC1Q9NRI5 854 aa28.39■■■□□ 2.14
PDF-201ENST00000288022 GABBR1Q9UBS5 961 aa28.39■■■□□ 2.14
PDF-201ENST00000288022 TUBE1Q9UJT0 475 aa28.39■■■□□ 2.14
PDF-201ENST00000288022 SFNP31947 248 aa28.38■■■□□ 2.13
PDF-201ENST00000288022 JAK3P52333 1124 aa28.38■■■□□ 2.13
PDF-201ENST00000288022 FBXO18Q8NFZ0 1043 aa28.38■■■□□ 2.13
PDF-201ENST00000288022 PARNO95453 639 aaKnown RBP28.37■■■□□ 2.13
PDF-201ENST00000288022 TRMT1LQ7Z2T5 733 aaKnown RBP28.37■■■□□ 2.13
PDF-201ENST00000288022 MIER3Q7Z3K6 550 aa28.37■■■□□ 2.13
PDF-201ENST00000288022 ATP8B4Q8TF62 1192 aa28.37■■■□□ 2.13
PDF-201ENST00000288022 HERVK_113Q902F9 699 aa28.37■■■□□ 2.13
PDF-201ENST00000288022 ZBBXA8MT70 800 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 RSPH10B2B2RC85 870 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 HBP1O60381 514 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 CTSHP09668 335 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 RSPH10BP0C881 870 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 ACTN1P12814 892 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 RUFY4Q6ZNE9 571 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 POTEDQ86YR6 584 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 TRAPPC12Q8WVT3 735 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 VWCEQ96DN2 955 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 FAM20AQ96MK3 541 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 KCNMB3Q9NPA1 279 aa28.36■■■□□ 2.13
PDF-201ENST00000288022 MAFBQ9Y5Q3 323 aaPredicted RBP28.36■■■□□ 2.13
PDF-201ENST00000288022 ATP2B1P20020 1258 aa28.35■■■□□ 2.13
PDF-201ENST00000288022 MARCH8Q5T0T0 291 aa28.35■■■□□ 2.13
PDF-201ENST00000288022 TAF2Q6P1X5 1199 aa28.35■■■□□ 2.13
PDF-201ENST00000288022 FOXP1Q9H334 677 aaPredicted RBP28.35■■■□□ 2.13
PDF-201ENST00000288022 TBX3O15119 743 aa28.34■■■□□ 2.13
PDF-201ENST00000288022 CAND2O75155 1236 aa28.34■■■□□ 2.13
PDF-201ENST00000288022 BAG4O95429 457 aaKnown RBP28.34■■■□□ 2.13
PDF-201ENST00000288022 TRAF7Q6Q0C0 670 aa28.34■■■□□ 2.13
PDF-201ENST00000288022 RSPH3Q86UC2 560 aa28.34■■■□□ 2.13
PDF-201ENST00000288022 RDM1Q8NG50 284 aa28.34■■■□□ 2.13
PDF-201ENST00000288022 ZBTB10Q96DT7 871 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms