RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CCDC144BQ3MJ40 725 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 PRAMEF19Q5SWL8 479 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 DHX37Q8IY37 1157 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 TRMT44Q8IYL2 757 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 BANK1Q8NDB2 785 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 LARP4BQ92615 738 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 RAD54LQ92698 747 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 MTRQ99707 1265 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 LXNQ9BS40 222 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 WBP1LQ9NX94 342 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 TELO2Q9Y4R8 837 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 ZNF865P0CJ78 1059 aaPredicted RBP21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 QARSP47897 775 aaKnown RBP21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 PNOCQ13519 176 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 MIS18BP1Q6P0N0 1132 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 GRAMD1CQ8IYS0 662 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 TRIB2Q92519 343 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 COPS5Q92905 334 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 ZSWIM4Q9H7M6 989 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 WRAP73Q9P2S5 460 aaPredicted RBP21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 NRBP1Q9UHY1 535 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 DNM3Q9UQ16 869 aa21.15■□□□□ 0.98
PDLIM3-202ENST00000284770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.14■□□□□ 0.97
PDLIM3-202ENST00000284770 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.14■□□□□ 0.97
PDLIM3-202ENST00000284770 E9PMD0 336 aa21.14■□□□□ 0.97
PDLIM3-202ENST00000284770 DUSP28Q4G0W2 176 aa21.14■□□□□ 0.97
PDLIM3-202ENST00000284770 SV2BQ7L1I2 683 aa21.14■□□□□ 0.97
PDLIM3-202ENST00000284770 STAMQ92783 540 aa21.14■□□□□ 0.97
PDLIM3-202ENST00000284770 KIAA1468Q9P260 1216 aa21.14■□□□□ 0.97
PDLIM3-202ENST00000284770 NKRFO15226 690 aaKnown RBP eCLIP21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 GH1P01241 217 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 SUPT20HL2P0C7V6 817 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 CCDC192P0DO97 292 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 SMPD1P17405 629 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 PSMC5P62195 406 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 PSMC6P62333 389 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 TYRO3Q06418 890 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 LAMC2Q13753 1193 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 MFSD14CQ5VZR4 134 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 SEPT1Q8WYJ6 367 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 ERCC4Q92889 916 aaPredicted RBP21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 NACC1Q96RE7 527 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 TSKSQ9UJT2 592 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 DOCK5Q9H7D0 1870 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 GSTTP1A0A1W2PQM5 241 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 LYPLA2O95372 231 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 AMPD3Q01432 767 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 ARHGAP1Q07960 439 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 MCM6Q14566 821 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 HSDL1Q3SXM5 330 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 SWSAP1Q6NVH7 229 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 EMID1Q96A84 441 aaPredicted RBP21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 SPATA33Q96N06 139 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 RBSNQ9H1K0 784 aa21.13■□□□□ 0.97
PDLIM3-202ENST00000284770 A0A087WWV3 80 aa21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 IGKV6D-21A0A0A0MT36 114 aa21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 NOP56O00567 594 aaKnown RBP21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 MYL1P05976 194 aa21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 PRR29P0C7W0 189 aa21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 TNFAIP2Q03169 654 aa21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 UGCGQ16739 394 aa21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 CCDC60Q8IWA6 550 aaPredicted RBP21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 C4orf19Q8IY42 314 aa21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 ATP6V0A1Q93050 837 aa21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 GPR20Q99678 358 aa21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 GABBR1Q9UBS5 961 aa21.12■□□□□ 0.97
PDLIM3-202ENST00000284770 CASP8AP2Q9UKL3 1982 aa21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 GTPBP6O43824 516 aaPredicted RBP21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 DKC1O60832 514 aaKnown RBP eCLIP21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 EYA4O95677 639 aa21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 PLA2G4BP0C869 781 aa21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 DPYDQ12882 1025 aa21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 GJC2Q5T442 439 aaPredicted RBP21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 SASS6Q6UVJ0 657 aa21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 PIGOQ8TEQ8 1089 aa21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 LRRC27Q9C0I9 530 aa21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 GRPEL1Q9HAV7 217 aa21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 PCDHA5Q9Y5H7 936 aa21.11■□□□□ 0.97
PDLIM3-202ENST00000284770 BACH1O14867 736 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 PTGS1P23219 599 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 TCF7P36402 384 aaPredicted RBP21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 SLC12A3P55017 1021 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 PRMT2P55345 433 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 DHX8Q14562 1220 aaKnown RBP21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 SYT2Q8N9I0 419 aaPredicted RBP21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 TUBE1Q9UJT0 475 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 FAM184BQ9ULE4 1060 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 ZBTB39O15060 712 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 ADCY6O43306 1168 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 SMC2O95347 1197 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 XRCC6P12956 609 aaKnown RBP eCLIP21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 CYBAP13498 195 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 CASP1P29466 404 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 CUL4BQ13620 913 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 NT5DC1Q5TFE4 455 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 PPTC7Q8NI37 304 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 SPATA20Q8TB22 786 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 RAET1EQ8TD07 263 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 C7orf25Q9BPX7 421 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 TRIM9Q9C026 710 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms