RNA–Protein interactions for RNA: ENST00000283233.9

CCDC148-201, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 3,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-201ENST00000283233 PYGMP11217 842 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 PBX1P40424 430 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 PEX5P50542 639 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 CNPY1Q3B7I2 92 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 SSH3Q8TE77 659 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 DNAJC9Q8WXX5 260 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 AGBL1Q96MI9 1066 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 NR1H4Q96RI1 486 aaPredicted RBP13.23□□□□□ -0.29
CCDC148-201ENST00000283233 CCDC8Q9H0W5 538 aaPredicted RBP13.23□□□□□ -0.29
CCDC148-201ENST00000283233 ECHDC1Q9NTX5 307 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 UBR3Q6ZT12 1888 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 ARFGEF2Q9Y6D5 1785 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 IFIT3O14879 490 aaKnown RBP13.23□□□□□ -0.29
CCDC148-201ENST00000283233 UBTFL6P0CB48 400 aaPredicted RBP13.23□□□□□ -0.29
CCDC148-201ENST00000283233 ZCCHC18P0CG32 403 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 CTNNA1P35221 906 aaKnown RBP13.23□□□□□ -0.29
CCDC148-201ENST00000283233 HOXD12P35452 270 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 SUPT20HQ8NEM7 779 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 DNAJC1Q96KC8 554 aaKnown RBP13.23□□□□□ -0.29
CCDC148-201ENST00000283233 VCX3BQ9H321 246 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 SPON1Q9HCB6 807 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 VCX3AQ9NNX9 186 aa13.23□□□□□ -0.29
CCDC148-201ENST00000283233 MAGEA13PA6NCF6 341 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 KRT86O43790 486 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 PENKP01210 267 aaPredicted RBP13.22□□□□□ -0.29
CCDC148-201ENST00000283233 HMGB2P26583 209 aaKnown RBP13.22□□□□□ -0.29
CCDC148-201ENST00000283233 MLH1P40692 756 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 OXCT1P55809 520 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 IFT20Q8IY31 132 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 CYP4X1Q8N118 509 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 CASKIN2Q8WXE0 1202 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 SELENOSQ9BQE4 189 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 MLXIPQ9HAP2 919 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 SNX12Q9UMY4 172 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 TDRKHQ9Y2W6 561 aaKnown RBP13.22□□□□□ -0.29
CCDC148-201ENST00000283233 CAPN6Q9Y6Q1 641 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 SRRM3A6NNA2 597 aaPredicted RBP13.22□□□□□ -0.29
CCDC148-201ENST00000283233 EIF3FO00303 357 aaPredicted RBP13.22□□□□□ -0.29
CCDC148-201ENST00000283233 METTL24Q5JXM2 366 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 ZC3H18Q86VM9 953 aaKnown RBP13.22□□□□□ -0.29
CCDC148-201ENST00000283233 RETREG2Q8NC44 543 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 RNF25Q96BH1 459 aaPredicted RBP13.22□□□□□ -0.29
CCDC148-201ENST00000283233 EVI5LQ96CN4 794 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 TRAPPC9Q96Q05 1148 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 SAMD15Q9P1V8 674 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 MYH7P12883 1935 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 CYP1A1P04798 512 aaPredicted RBP13.22□□□□□ -0.29
CCDC148-201ENST00000283233 CYP21A2P08686 494 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 GNAT2P19087 354 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 HSD17B3P37058 310 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 TIMM10P62072 90 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 ZNF844Q08AG5 666 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 SEPT2Q15019 361 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 POSTNQ15063 836 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 STOX1Q6ZVD7 989 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 NEK9Q8TD19 979 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 UBLCP1Q8WVY7 318 aaPredicted RBP13.22□□□□□ -0.29
CCDC148-201ENST00000283233 LLPHQ9BRT6 129 aaKnown RBP13.22□□□□□ -0.29
CCDC148-201ENST00000283233 PCDH18Q9HCL0 1135 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 JAG2Q9Y219 1238 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 DAAM1Q9Y4D1 1078 aa13.22□□□□□ -0.29
CCDC148-201ENST00000283233 AFDNP55196 1824 aaKnown RBP13.21□□□□□ -0.29
CCDC148-201ENST00000283233 MYH15Q9Y2K3 1946 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 MYH10P35580 1976 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 MYH13Q9UKX3 1938 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 H0YIN7 160 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 IPO5O00410 1097 aaKnown RBP13.21□□□□□ -0.29
CCDC148-201ENST00000283233 GNAZP19086 355 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 NFKBIAP25963 317 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 PTPN12Q05209 780 aaKnown RBP13.21□□□□□ -0.29
CCDC148-201ENST00000283233 AACSQ86V21 672 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 CLASRPQ8N2M8 674 aaKnown RBP13.21□□□□□ -0.29
CCDC148-201ENST00000283233 AIFM3Q96NN9 605 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 SERTAD1Q9UHV2 236 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 HPSEQ9Y251 543 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 HYOU1Q9Y4L1 999 aa13.21□□□□□ -0.29
CCDC148-201ENST00000283233 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.3
CCDC148-201ENST00000283233 DPEP1P16444 411 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 VARSP26640 1264 aaKnown RBP13.21□□□□□ -0.3
CCDC148-201ENST00000283233 PTDSS1P48651 473 aaKnown RBP13.21□□□□□ -0.3
CCDC148-201ENST00000283233 PDE6CP51160 858 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 CCNG1P51959 295 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 RASSF7Q02833 373 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 TFCP2Q12800 502 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 TSNAXIP1Q2TAA8 658 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 TMEM53Q6P2H8 277 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 DDX42Q86XP3 938 aaKnown RBP eCLIP13.21□□□□□ -0.3
CCDC148-201ENST00000283233 RNF10Q8N5U6 811 aaKnown RBP13.21□□□□□ -0.3
CCDC148-201ENST00000283233 NLGN2Q8NFZ4 835 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 WDR66Q8TBY9 1149 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 BCS1LQ9Y276 419 aa13.21□□□□□ -0.3
CCDC148-201ENST00000283233 SYNRGQ9UMZ2 1314 aa13.2□□□□□ -0.3
CCDC148-201ENST00000283233 POLR2DO15514 142 aaKnown RBP13.2□□□□□ -0.3
CCDC148-201ENST00000283233 KRT38O76015 456 aa13.2□□□□□ -0.3
CCDC148-201ENST00000283233 MOCS3O95396 460 aa13.2□□□□□ -0.3
CCDC148-201ENST00000283233 MMEP08473 750 aa13.2□□□□□ -0.3
CCDC148-201ENST00000283233 GBP1P32455 592 aa13.2□□□□□ -0.3
CCDC148-201ENST00000283233 GRIN1Q05586 938 aa13.2□□□□□ -0.3
CCDC148-201ENST00000283233 KRT71Q3SY84 523 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms