RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 LRRC63Q05C16 580 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 SPIRE1Q08AE8 756 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ORC2Q13416 577 aaPredicted RBP6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 GIT2Q14161 759 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ODR4Q5SWX8 454 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 GJB7Q6PEY0 223 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 GOLGA1Q92805 767 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 WNK4Q96J92 1243 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 WRNIP1Q96S55 665 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 LXNQ9BS40 222 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 PARD6BQ9BYG5 372 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ZMYND15Q9H091 742 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 KCND1Q9NSA2 647 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ARHGAP20Q9P2F6 1191 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ADAMTS1Q9UHI8 967 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 HACL1Q9UJ83 578 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 MYH4Q9Y623 1939 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 CTAGE15A4D2H0 777 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 ARHGEF35A5YM69 484 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 TMCO5BA8MYB1 307 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 TISP43B9A030 160 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 NCK2O43639 380 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 CTAGE8P0CG41 777 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 MAGEA1P43355 309 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 HMGCS2P54868 508 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 KRT83P78385 493 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 KCNH2Q12809 1159 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 MUM1L1Q5H9M0 696 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 CTAGE6Q86UF2 777 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 CTAGE4Q8IX94 777 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 NOA1Q8NC60 698 aaKnown RBP6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 ELMO3Q96BJ8 720 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 PSMD1Q99460 953 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 DNAJC7Q99615 494 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 NAP1L4Q99733 375 aaKnown RBP6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 UNC45AQ9H3U1 944 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 SH2D4AQ9H788 454 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 ZNF446Q9NWS9 450 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 EHD2Q9NZN4 543 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 COL20A1Q9P218 1284 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 WRAP73Q9P2S5 460 aaPredicted RBP6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 ARMCX3Q9UH62 379 aaPredicted RBP6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 CDC23Q9UJX2 597 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 ZHX2Q9Y6X8 837 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 MYH7BA7E2Y1 1941 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 EFCAB8A8MWE9 144 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 FKBP1AP62942 108 aaKnown RBP6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 ANGEL2Q5VTE6 544 aaKnown RBP6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 MIER3Q7Z3K6 550 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 FAM178BQ8IXR5 827 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 ATG4CQ96DT6 458 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 FAM20AQ96MK3 541 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 NUP58Q9BVL2 599 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 GOLPH3Q9H4A6 298 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 MYO6Q9UM54 1294 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 NFKBIEO00221 500 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 ZNF263O14978 683 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 SLITRK3O94933 977 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 TRIM49P0CI25 452 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 TRIM49CP0CI26 452 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 ITGB5P18084 799 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 PPP1R2P41236 205 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 RPS6P62753 249 aaKnown RBP6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 RINT1Q6NUQ1 792 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 OTOP1Q7RTM1 612 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 TAAR1Q96RJ0 339 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 RPAP3Q9H6T3 665 aaPredicted RBP6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 GPRC5CQ9NQ84 441 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 KCNH7Q9NS40 1196 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 VAV3Q9UKW4 847 aa6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 PACSIN2Q9UNF0 486 aaPredicted RBP6.66□□□□□ -1.34
TNFSF4-201ENST00000281834 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 IGLV3-22A0A075B6J6 115 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 PHACTR2O75167 634 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 AKAP3O75969 853 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 KIF20AO95235 890 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 XRCC5P13010 732 aaKnown RBP6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 ZSCAN20P17040 1043 aaPredicted RBP6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 USP8P40818 1118 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 SOX10P56693 466 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 KCNMA1Q12791 1236 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 KNOP1Q1ED39 458 aaKnown RBP6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 ARHGAP27Q6ZUM4 889 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 SRGAP1Q7Z6B7 1085 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 SYT2Q8N9I0 419 aaPredicted RBP6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 PRPF38AQ8NAV1 312 aaKnown RBP6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 SECISBP2LQ93073 1101 aaKnown RBP6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 ERGIC2Q96RQ1 377 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 RMDN3Q96TC7 470 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 KIFC3Q9BVG8 833 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 TEKT3Q9BXF9 490 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 HAUS4Q9H6D7 363 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 ZHX1Q9UKY1 873 aaPredicted RBP6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 SIK3Q9Y2K2 1263 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 CAPN6Q9Y6Q1 641 aa6.65□□□□□ -1.34
TNFSF4-201ENST00000281834 NR3C1P04150 777 aa6.65□□□□□ -1.35
TNFSF4-201ENST00000281834 TUBB4AP04350 444 aa6.65□□□□□ -1.35
TNFSF4-201ENST00000281834 VCAM1P19320 739 aa6.65□□□□□ -1.35
TNFSF4-201ENST00000281834 TNNT3P45378 269 aaPredicted RBP6.65□□□□□ -1.35
TNFSF4-201ENST00000281834 NOP2P46087 812 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms