RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 PPP1R2P41236 205 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 CCDC65Q8IXS2 484 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 GPRASP2Q96D09 838 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 RRAGCQ9HB90 399 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 IRX3P78415 501 aaPredicted RBP13.47□□□□□ -0.25
SDE2-201ENST00000272091 LRRC55Q6ZSA7 311 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 EPM2AIP1Q7L775 607 aaPredicted RBP13.47□□□□□ -0.25
SDE2-201ENST00000272091 SFR1Q86XK3 245 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 CSGALNACT2Q8N6G5 542 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 VPS16Q9H269 839 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 ZNF408Q9H9D4 720 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 TBC1D22BQ9NU19 505 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 MYH11P35749 1972 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 BICDL2A1A5D9 508 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 TMEM139Q8IV31 216 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 CTAGE1Q96RT6 745 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 PAGR1Q9BTK6 254 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 KCTD10Q9H3F6 313 aa13.47□□□□□ -0.25
SDE2-201ENST00000272091 SOWAHBA6NEL2 793 aa13.46□□□□□ -0.25
SDE2-201ENST00000272091 HERC4Q5GLZ8 1057 aaPredicted RBP13.46□□□□□ -0.25
SDE2-201ENST00000272091 SPECC1LQ69YQ0 1117 aa13.46□□□□□ -0.25
SDE2-201ENST00000272091 FGD4Q96M96 766 aa13.46□□□□□ -0.25
SDE2-201ENST00000272091 TMX1Q9H3N1 280 aa13.46□□□□□ -0.25
SDE2-201ENST00000272091 BMP2KQ9NSY1 1161 aaPredicted RBP13.46□□□□□ -0.25
SDE2-201ENST00000272091 ZNFX1Q9P2E3 1918 aaKnown RBP13.46□□□□□ -0.25
SDE2-201ENST00000272091 MYOCDQ8IZQ8 938 aa13.46□□□□□ -0.25
SDE2-201ENST00000272091 CCDC150Q8NCX0 1101 aa13.46□□□□□ -0.25
SDE2-201ENST00000272091 ZNF507Q8TCN5 953 aa13.46□□□□□ -0.25
SDE2-201ENST00000272091 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.25
SDE2-201ENST00000272091 EEF1GP26641 437 aaKnown RBP13.46□□□□□ -0.26
SDE2-201ENST00000272091 SPAG1Q07617 926 aa13.46□□□□□ -0.26
SDE2-201ENST00000272091 MIIPQ5JXC2 388 aa13.46□□□□□ -0.26
SDE2-201ENST00000272091 TC2NQ8N9U0 490 aa13.46□□□□□ -0.26
SDE2-201ENST00000272091 NEK9Q8TD19 979 aa13.46□□□□□ -0.26
SDE2-201ENST00000272091 NOC3LQ8WTT2 800 aaKnown RBP13.46□□□□□ -0.26
SDE2-201ENST00000272091 NACC1Q96RE7 527 aa13.46□□□□□ -0.26
SDE2-201ENST00000272091 FIZ1Q96SL8 496 aa13.46□□□□□ -0.26
SDE2-201ENST00000272091 P4HBP07237 508 aaKnown RBP13.45□□□□□ -0.26
SDE2-201ENST00000272091 SP2Q02086 613 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 NOLC1Q14978 699 aaKnown RBP eCLIP13.45□□□□□ -0.26
SDE2-201ENST00000272091 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.45□□□□□ -0.26
SDE2-201ENST00000272091 CNOT6LQ96LI5 555 aaKnown RBP13.45□□□□□ -0.26
SDE2-201ENST00000272091 TMEM150BA6NC51 233 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 KRT18P05783 430 aaKnown RBP13.45□□□□□ -0.26
SDE2-201ENST00000272091 MYBP10242 640 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 SKILP12757 684 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 ERCC3P19447 782 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 ALDH5A1P51649 535 aaPredicted RBP13.45□□□□□ -0.26
SDE2-201ENST00000272091 FOXR2Q6PJQ5 311 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 DNERQ8NFT8 737 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 SENP7Q9BQF6 1050 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 PFASO15067 1338 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 SPATA31C2B4DYI2 1134 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 MAPK7Q13164 816 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 FASTKD5Q7L8L6 764 aaKnown RBP13.45□□□□□ -0.26
SDE2-201ENST00000272091 NCAPG2Q86XI2 1143 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
SDE2-201ENST00000272091 SFI1A8K8P3 1242 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 LYPLA2O95372 231 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 EDNRBP24530 442 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 SNAPC2Q13487 334 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 NELFCDQ8IXH7 590 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 ZC3H3Q8IXZ2 948 aaKnown RBP13.44□□□□□ -0.26
SDE2-201ENST00000272091 DAW1Q8N136 415 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 FAM133AQ8N9E0 248 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 SLC10A4Q96EP9 437 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 PLXNB2O15031 1838 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 RNF225M0QZC1 329 aaPredicted RBP13.44□□□□□ -0.26
SDE2-201ENST00000272091 LRRC63Q05C16 580 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 IWS1Q96ST2 819 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 ITIH6Q6UXX5 1313 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 USP27XA6NNY8 438 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 LGALS16A8MUM7 142 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 N4BP3O15049 544 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 STBD1O95210 358 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 CYP2C8P10632 490 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 ZNF131P52739 623 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 NLRX1Q86UT6 975 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 ZHX3Q9H4I2 956 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 FBXO40Q9UH90 709 aa13.44□□□□□ -0.26
SDE2-201ENST00000272091 ZMYM2Q9UBW7 1377 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 UNCXA6NJT0 531 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 SFPQP23246 707 aaKnown RBP eCLIP13.43□□□□□ -0.26
SDE2-201ENST00000272091 ADKP55263 362 aaKnown RBP13.43□□□□□ -0.26
SDE2-201ENST00000272091 ZSWIM4Q9H7M6 989 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 DBR1Q9UK59 544 aaKnown RBP13.43□□□□□ -0.26
SDE2-201ENST00000272091 NFASCO94856 1347 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 TRPM7Q96QT4 1865 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 SOCS7O14512 581 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 STAM2O75886 525 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 GYPCP04921 128 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 QARSP47897 775 aaKnown RBP13.43□□□□□ -0.26
SDE2-201ENST00000272091 KRT76Q01546 638 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 RBL2Q08999 1139 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 CREBRFQ8IUR6 639 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 RASSF10A6NK89 507 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 MAFGO15525 162 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 JAK3P52333 1124 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 KCNA1Q09470 495 aa13.43□□□□□ -0.26
SDE2-201ENST00000272091 BMT2Q1RMZ1 405 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms