RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ANO9A1A5B4 782 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 OPLAHO14841 1288 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 ENTPD3O75355 529 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 TACC1O75410 805 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 KIF20AO95235 890 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 EPS15P42566 896 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 CASP5P51878 434 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 APBA1Q02410 837 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 CYP4A11Q02928 519 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 TDRD12Q587J7 1177 aaKnown RBP14.23□□□□□ -0.13
CPSF6-201ENST00000266679 HDXQ7Z353 690 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 ZCCHC17Q9NP64 241 aaKnown RBP14.23□□□□□ -0.13
CPSF6-201ENST00000266679 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPSF6-201ENST00000266679 PSME4Q14997 1843 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 MYH10P35580 1976 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 FRMD3A2A2Y4 597 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 YDJCA8MPS7 323 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 TCP10L2B9ZVM9 353 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 H3BQF6 201 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 GNA14O95837 355 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 SPATA31C1P0DKV0 1188 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 MAGEA1P43355 309 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 USP14P54578 494 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 GFPT1Q06210 699 aaPredicted RBP14.22□□□□□ -0.13
CPSF6-201ENST00000266679 MAP1SQ66K74 1059 aaPredicted RBP14.22□□□□□ -0.13
CPSF6-201ENST00000266679 LDHDQ86WU2 507 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 SFR1Q86XK3 245 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 TRIM59Q8IWR1 403 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 REEP2Q9BRK0 252 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 GBP3Q9H0R5 595 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.22□□□□□ -0.13
CPSF6-201ENST00000266679 CEP72Q9P209 647 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 PRR12Q9ULL5 1215 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 PDE2AO00408 941 aaPredicted RBP14.22□□□□□ -0.13
CPSF6-201ENST00000266679 TBX3O15119 743 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 MSH4O15457 936 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 NOL4O94818 638 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 LCA5LO95447 670 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 FOSP01100 380 aaPredicted RBP14.22□□□□□ -0.13
CPSF6-201ENST00000266679 ZNF76P36508 570 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 ECE1P42892 770 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 MMP14P50281 582 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 POLR2FP61218 127 aaKnown RBP14.22□□□□□ -0.13
CPSF6-201ENST00000266679 C2orf54Q08AI8 447 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 ADAM9Q13443 819 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 GIT2Q14161 759 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 MCTP2Q6DN12 878 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 CYP2W1Q8TAV3 490 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 EDEM3Q9BZQ6 932 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 DNM3Q9UQ16 869 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 PITPNM2Q9BZ72 1349 aa14.22□□□□□ -0.13
CPSF6-201ENST00000266679 CLRN2A0PK11 232 aa14.21□□□□□ -0.13
CPSF6-201ENST00000266679 ERICH4A6NGS2 130 aa14.21□□□□□ -0.13
CPSF6-201ENST00000266679 RAD17O75943 681 aa14.21□□□□□ -0.13
CPSF6-201ENST00000266679 RPA1P27694 616 aa14.21□□□□□ -0.13
CPSF6-201ENST00000266679 SFMBT2Q5VUG0 894 aa14.21□□□□□ -0.13
CPSF6-201ENST00000266679 ANKRD13CQ8N6S4 541 aa14.21□□□□□ -0.13
CPSF6-201ENST00000266679 TRIM58Q8NG06 486 aa14.21□□□□□ -0.13
CPSF6-201ENST00000266679 PDE11AQ9HCR9 933 aa14.21□□□□□ -0.13
CPSF6-201ENST00000266679 VAV3Q9UKW4 847 aa14.21□□□□□ -0.13
CPSF6-201ENST00000266679 COL2A1P02458 1487 aaPredicted RBP14.21□□□□□ -0.14
CPSF6-201ENST00000266679 MYBP10242 640 aa14.21□□□□□ -0.14
CPSF6-201ENST00000266679 NR2F2P24468 414 aa14.21□□□□□ -0.14
CPSF6-201ENST00000266679 CXCL9Q07325 125 aa14.21□□□□□ -0.14
CPSF6-201ENST00000266679 GRIPAP1Q4V328 841 aa14.21□□□□□ -0.14
CPSF6-201ENST00000266679 KIAA1755Q5JYT7 1200 aa14.21□□□□□ -0.14
CPSF6-201ENST00000266679 FAM83BQ5T0W9 1011 aa14.21□□□□□ -0.14
CPSF6-201ENST00000266679 HGSNATQ68CP4 663 aa14.21□□□□□ -0.14
CPSF6-201ENST00000266679 BTNL9Q6UXG8 535 aa14.21□□□□□ -0.14
CPSF6-201ENST00000266679 ZC3H3Q8IXZ2 948 aaKnown RBP14.21□□□□□ -0.14
CPSF6-201ENST00000266679 SYT2Q8N9I0 419 aaPredicted RBP14.21□□□□□ -0.14
CPSF6-201ENST00000266679 SNX12Q9UMY4 172 aa14.21□□□□□ -0.14
CPSF6-201ENST00000266679 L1RE1Q9UN81 338 aa14.21□□□□□ -0.14
CPSF6-201ENST00000266679 RBBP6Q7Z6E9 1792 aaKnown RBP14.2□□□□□ -0.14
CPSF6-201ENST00000266679 SHTN1A0MZ66 631 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 RSPH10B2B2RC85 870 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 CETN3O15182 167 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 TLR2O60603 784 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 RSPH10BP0C881 870 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 MARSP56192 900 aaKnown RBP14.2□□□□□ -0.14
CPSF6-201ENST00000266679 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
CPSF6-201ENST00000266679 RAPGEF1Q13905 1077 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 ASTE1Q2TB18 679 aaPredicted RBP14.2□□□□□ -0.14
CPSF6-201ENST00000266679 WDR93Q6P2C0 686 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 CCDC174Q6PII3 467 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 SLC30A10Q6XR72 485 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 ACER1Q8TDN7 264 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 PKNOX2Q96KN3 472 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 FAM20AQ96MK3 541 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 ALS2CR12Q96Q35 445 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 RUSC1Q9BVN2 902 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 POLD4Q9HCU8 107 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 TMOD2Q9NZR1 351 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 JRKLQ9Y4A0 524 aa14.2□□□□□ -0.14
CPSF6-201ENST00000266679 SSU72P8A0A1W2PR75 194 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 EML1O00423 815 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 NCK2O43639 380 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 PRPF6O94906 941 aaKnown RBP14.19□□□□□ -0.14
CPSF6-201ENST00000266679 TUBBP07437 444 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 CIITAP33076 1130 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms