RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 IRAK1P51617 712 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 NTRK3Q16288 839 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 MAN2A1Q16706 1144 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 UBL4BQ8N7F7 174 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 PIGSQ96S52 555 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 CUEDC2Q9H467 287 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 MAGEF1Q9HAY2 307 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 KCND1Q9NSA2 647 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 BARHL2Q9NY43 387 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 HPCAL4Q9UM19 191 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 PSMD14O00487 310 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 HIP1RO75146 1068 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 MYL1P05976 194 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 CACNB3P54284 484 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 GLE1Q53GS7 698 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 AK8Q96MA6 479 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 GINM1Q9NU53 330 aa12.58□□□□□ -0.4
CLSTN3-201ENST00000266546 ZBED4O75132 1171 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 PRCPP42785 496 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 RHBDL3P58872 404 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 TSNAXIP1Q2TAA8 658 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 LRRC31Q6UY01 552 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 GSTA5Q7RTV2 222 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 MSANTD4Q8NCY6 345 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 PHF20Q9BVI0 1012 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 PCDHA1Q9Y5I3 950 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 IKBKGQ9Y6K9 419 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 GNA14O95837 355 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 IFNAR2P48551 515 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 PPP2R5EQ16537 467 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 MPHOSPH6Q99547 160 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 MXD3Q9BW11 206 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 INTS9Q9NV88 658 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 ZNF70Q9UC06 446 aaPredicted RBP12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 NOVA2Q9UNW9 492 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 CNTNAP5Q8WYK1 1306 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 ATP2A1O14983 1001 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 FAM13AO94988 1023 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 GDF11O95390 407 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 GH2P01242 217 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 H2AFZP0C0S5 128 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 CCNI2Q6ZMN8 369 aaPredicted RBP12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 H2AFVQ71UI9 128 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 APOBEC3FQ8IUX4 373 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 CCDC105Q8IYK2 499 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 ANKRD42Q8N9B4 389 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 UHMK1Q8TAS1 419 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 LRP5O75197 1615 aa12.57□□□□□ -0.4
CLSTN3-201ENST00000266546 USP17L5A8MUK1 530 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 EIF3HO15372 352 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 MEFVO15553 781 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 U2AF1L4Q8WU68 220 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 CTTNBP2NLQ9P2B4 639 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 ZBTB5O15062 677 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 GYPCP04921 128 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 ACTN3Q08043 901 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 SYDE2Q5VT97 1194 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 FKBP1CQ5VVH2 108 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 NAA35Q5VZE5 725 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 ADAT2Q7Z6V5 191 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 SPATA4Q8NEY3 305 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 OSBPL9Q96SU4 736 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 CPVLQ9H3G5 476 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 NDST4Q9H3R1 872 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 CXorf56Q9H5V9 222 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 TRIM10Q9UDY6 481 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 ASIC3Q9UHC3 531 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 PLAAQ9Y263 795 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 EEF2P13639 858 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 ZYXQ15942 572 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 HAUS3Q68CZ6 603 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 NFRKBQ6P4R8 1299 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 DISC1Q9NRI5 854 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 ATP8A1Q9Y2Q0 1164 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 ROBO3Q96MS0 1386 aa12.56□□□□□ -0.4
CLSTN3-201ENST00000266546 ESYT3A0FGR9 886 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 ABCB4P21439 1286 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 MXRA7P84157 204 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 SEPT2Q15019 361 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 CLUL1Q15846 466 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 USP49Q70CQ1 688 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 MLXIPQ9HAP2 919 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 PARP2Q9UGN5 583 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 COL5A3P25940 1745 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 PGRMC1O00264 195 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 ZNF185O15231 689 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 STX2P32856 288 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 STAT2P52630 851 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 DHX9Q08211 1270 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 ZNF543Q08ER8 600 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 USH1GQ495M9 461 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 CCDC38Q502W7 563 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 APOBEC3HQ6NTF7 200 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 CCDC174Q6PII3 467 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 STMN2Q93045 179 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 LRRC1Q9BTT6 524 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 IQCGQ9H095 443 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 KLHL14Q9P2G3 628 aa12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 LIMA1Q9UHB6 759 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-201ENST00000266546 LCMT1Q9UIC8 334 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms