RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 SMARCA1P28370 1054 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 ADAM15Q13444 863 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 FBXO47Q5MNV8 452 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 IER5Q5VY09 327 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 RNF135Q8IUD6 432 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 CMTR2Q8IYT2 770 aaKnown RBP10.29□□□□□ -0.76
LCN1-201ENST00000263598 MAP3K14Q99558 947 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 LZTS2Q9BRK4 669 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 SPZ1Q9BXG8 430 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 SENP2Q9HC62 589 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 ALG13Q9NP73 1137 aaKnown RBP10.29□□□□□ -0.76
LCN1-201ENST00000263598 PLAGL2Q9UPG8 496 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 CDY2AQ9Y6F7 541 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 BRWD1Q9NSI6 2320 aa10.29□□□□□ -0.76
LCN1-201ENST00000263598 NLRC5Q86WI3 1866 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 GSTTP1A0A1W2PQM5 241 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 MAFGO15525 162 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 ATP9AO75110 1047 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 DDAH1O94760 285 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 STAG3L1P0CL83 205 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 KCNA2P16389 499 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 GTF2F1P35269 517 aaKnown RBP eCLIP10.28□□□□□ -0.76
LCN1-201ENST00000263598 GNAQP50148 359 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 IGBP1P78318 339 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 MRPS6P82932 125 aaKnown RBP10.28□□□□□ -0.76
LCN1-201ENST00000263598 MTMR1Q13613 665 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 MARCH8Q5T0T0 291 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 NPAS4Q8IUM7 802 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 IGDCC4Q8TDY8 1250 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 EDAQ92838 391 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 AZI2Q9H6S1 392 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 PSTPIP2Q9H939 334 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 MRPL42Q9Y6G3 142 aaKnown RBP10.28□□□□□ -0.76
LCN1-201ENST00000263598 SQORQ9Y6N5 450 aa10.28□□□□□ -0.76
LCN1-201ENST00000263598 SPDYE3A6NKU9 549 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 LINC01565O15544 149 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 EYA4O95677 639 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 ITGB5P18084 799 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 CD52P31358 61 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 PTH1RQ03431 593 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 PAK2Q13177 524 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 PKN1Q16512 942 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 CASC1Q6TDU7 716 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 BMP8AQ7Z5Y6 402 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 ZNF654Q8IZM8 581 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 EFHBQ8N7U6 833 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 KLHL23Q8NBE8 558 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 MSLNLQ96KJ4 702 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 FAM49AQ9H0Q0 323 aaPredicted RBP10.27□□□□□ -0.77
LCN1-201ENST00000263598 AGO3Q9H9G7 860 aaKnown RBP10.27□□□□□ -0.77
LCN1-201ENST00000263598 JPH1Q9HDC5 661 aaPredicted RBP10.27□□□□□ -0.77
LCN1-201ENST00000263598 LRFN2Q9ULH4 789 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 TRPC6Q9Y210 931 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 TRPV2Q9Y5S1 764 aa10.27□□□□□ -0.77
LCN1-201ENST00000263598 ITGB1P05556 798 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 CALM1P0DP23 149 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 CALM2P0DP24 149 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 CALM3P0DP25 149 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 SCG2P13521 617 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 INSRRP14616 1297 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 DNAJB1P25685 340 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 NRIP1P48552 1158 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 COASYQ13057 564 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 CAMK1Q14012 370 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 PAN2Q504Q3 1202 aaKnown RBP10.26□□□□□ -0.77
LCN1-201ENST00000263598 TTC22Q5TAA0 569 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 NFXL1Q6ZNB6 911 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 FAM43BQ6ZT52 329 aaPredicted RBP10.26□□□□□ -0.77
LCN1-201ENST00000263598 ADGRD2Q7Z7M1 963 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 SUGP1Q8IWZ8 645 aaKnown RBP10.26□□□□□ -0.77
LCN1-201ENST00000263598 CRIPAKQ8N1N5 446 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 TMTC2Q8N394 836 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 NME8Q8N427 588 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 SMRP1Q8NCR6 262 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 SPPL3Q8TCT6 385 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 POF1BQ8WVV4 589 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 LINC01599Q8WXQ3 324 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 PRRX2Q99811 253 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 MTA3Q9BTC8 594 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 MYL10Q9BUA6 226 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 LY9Q9HBG7 655 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 JADE2Q9NQC1 790 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 RNF216Q9NWF9 866 aaPredicted RBP10.26□□□□□ -0.77
LCN1-201ENST00000263598 PKD2L1Q9P0L9 805 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 PADI3Q9ULW8 664 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 PCDHA2Q9Y5H9 948 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 UBIAD1Q9Y5Z9 338 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 MUC6Q6W4X9 2439 aa10.26□□□□□ -0.77
LCN1-201ENST00000263598 FSD2A1L4K1 749 aa10.25□□□□□ -0.77
LCN1-201ENST00000263598 TMEM221A6NGB7 291 aa10.25□□□□□ -0.77
LCN1-201ENST00000263598 CCDC69A6NI79 296 aa10.25□□□□□ -0.77
LCN1-201ENST00000263598 M0R296 226 aa10.25□□□□□ -0.77
LCN1-201ENST00000263598 GSPT1P15170 499 aaKnown RBP10.25□□□□□ -0.77
LCN1-201ENST00000263598 CHMLP26374 656 aa10.25□□□□□ -0.77
LCN1-201ENST00000263598 PTPN5P54829 565 aa10.25□□□□□ -0.77
LCN1-201ENST00000263598 ANTXR2P58335 489 aa10.25□□□□□ -0.77
LCN1-201ENST00000263598 TMEM62Q0P6H9 643 aa10.25□□□□□ -0.77
LCN1-201ENST00000263598 SPOUT1Q5T280 376 aaKnown RBP10.25□□□□□ -0.77
LCN1-201ENST00000263598 TRIM67Q6ZTA4 783 aa10.25□□□□□ -0.77
LCN1-201ENST00000263598 PLPPR4Q7Z2D5 763 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms