RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 SFR1Q86XK3 245 aa18.14■□□□□ 0.49
ZNF541-201ENST00000263351 CNBD1Q8NA66 436 aa18.14■□□□□ 0.49
ZNF541-201ENST00000263351 PSTPIP2Q9H939 334 aa18.14■□□□□ 0.49
ZNF541-201ENST00000263351 CHORDC1Q9UHD1 332 aaPredicted RBP18.14■□□□□ 0.49
ZNF541-201ENST00000263351 HDAC9Q9UKV0 1011 aa18.14■□□□□ 0.49
ZNF541-201ENST00000263351 PCDHGC5Q9Y5F6 944 aa18.14■□□□□ 0.49
ZNF541-201ENST00000263351 CAPN7Q9Y6W3 813 aa18.14■□□□□ 0.49
ZNF541-201ENST00000263351 CNTNAP4Q9C0A0 1308 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 LDHCP07864 332 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 GTF2A1P52655 376 aaPredicted RBP18.13■□□□□ 0.49
ZNF541-201ENST00000263351 ZNF543Q08ER8 600 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 MKRN4PQ13434 485 aaPredicted RBP18.13■□□□□ 0.49
ZNF541-201ENST00000263351 DPH5Q9H2P9 285 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 RIC8AQ9NPQ8 531 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 ARFGEF1Q9Y6D6 1849 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 ESYT2A0FGR8 921 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 AKAP3O75969 853 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 HSD17B3P37058 310 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 CLK2P49760 499 aaKnown RBP18.13■□□□□ 0.49
ZNF541-201ENST00000263351 PDIA5Q14554 519 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 ALS2CLQ60I27 953 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 CERS5Q8N5B7 392 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 METTL13Q8N6R0 699 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 CDCA7Q9BWT1 371 aaPredicted RBP18.13■□□□□ 0.49
ZNF541-201ENST00000263351 OSGEPQ9NPF4 335 aa18.13■□□□□ 0.49
ZNF541-201ENST00000263351 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.13■□□□□ 0.49
ZNF541-201ENST00000263351 FGFR1OPO95684 399 aaKnown RBP18.12■□□□□ 0.49
ZNF541-201ENST00000263351 EPB41P11171 864 aaKnown RBP18.12■□□□□ 0.49
ZNF541-201ENST00000263351 PPP1R2P41236 205 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 SKOR1P84550 965 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 PAK2Q13177 524 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 CDC37Q16543 378 aaPredicted RBP18.12■□□□□ 0.49
ZNF541-201ENST00000263351 USH1GQ495M9 461 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 PRR16Q569H4 304 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 PRR5LQ6MZQ0 368 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 LEMD3Q9Y2U8 911 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 DAPK3O43293 454 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 LRRN2O75325 713 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 UCHL3P15374 230 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 INPP5BP32019 993 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 TCP10Q12799 353 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 AADACL2Q6P093 401 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 FAM196AQ6ZSG2 479 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 CATSPER3Q86XQ3 398 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 RNF10Q8N5U6 811 aaKnown RBP18.12■□□□□ 0.49
ZNF541-201ENST00000263351 SPAG5Q96R06 1193 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 REEP2Q9BRK0 252 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 RAB34Q9BZG1 259 aa18.12■□□□□ 0.49
ZNF541-201ENST00000263351 CNOT8Q9UFF9 292 aaKnown RBP18.12■□□□□ 0.49
ZNF541-201ENST00000263351 PNMA6FA0A0J9YX94 578 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 KIF4AO95239 1232 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 QPCTQ16769 361 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 TRIM51Q9BSJ1 452 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 PCDHB13Q9Y5F0 798 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 ADAMTSL1Q8N6G6 1762 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 IGSF9BQ9UPX0 1349 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 E7EVH7 732 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 TTI1O43156 1089 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 PON1P27169 355 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 HNRNPH1P31943 449 aaKnown RBP18.11■□□□□ 0.49
ZNF541-201ENST00000263351 COG2Q14746 738 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 RPS6KA1Q15418 735 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 RNF187Q5TA31 235 aaPredicted RBP18.11■□□□□ 0.49
ZNF541-201ENST00000263351 ZNF473Q8WTR7 871 aaKnown RBP18.11■□□□□ 0.49
ZNF541-201ENST00000263351 CUL5Q93034 780 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 EFCC1Q9HA90 598 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 ZNF287Q9HBT7 754 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 KCNQ5Q9NR82 932 aa18.11■□□□□ 0.49
ZNF541-201ENST00000263351 NOC2LQ9Y3T9 749 aaKnown RBP18.11■□□□□ 0.49
ZNF541-201ENST00000263351 SART1O43290 800 aaKnown RBP18.1■□□□□ 0.49
ZNF541-201ENST00000263351 ATP2C2O75185 946 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 HOXA13P31271 388 aaPredicted RBP18.1■□□□□ 0.49
ZNF541-201ENST00000263351 SHMT1P34896 483 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 ITGB3BPQ13352 177 aaPredicted RBP18.1■□□□□ 0.49
ZNF541-201ENST00000263351 DOK7Q18PE1 504 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 QRICH1Q2TAL8 776 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 RPGRQ92834 1020 aaKnown RBP18.1■□□□□ 0.49
ZNF541-201ENST00000263351 C8orf37Q96NL8 207 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 RGL1Q9NZL6 768 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 NAGPAQ9UK23 515 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 THRAP3Q9Y2W1 955 aaKnown RBP18.1■□□□□ 0.49
ZNF541-201ENST00000263351 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 GFPT2O94808 682 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 ABCB4P21439 1286 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 SLC12A3P55017 1021 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 GABPAQ06546 454 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 IFT88Q13099 833 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 LLGL1Q15334 1064 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 PTGISQ16647 500 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 ALKBH5Q6P6C2 394 aaKnown RBP18.1■□□□□ 0.49
ZNF541-201ENST00000263351 PALB2Q86YC2 1186 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 ATP6V1G3Q96LB4 118 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 GGA1Q9UJY5 639 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 FBXL5Q9UKA1 691 aa18.1■□□□□ 0.49
ZNF541-201ENST00000263351 SNHG28P0DPA3 235 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 TNFRSF8P28908 595 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 SEMA3FQ13275 785 aa18.09■□□□□ 0.49
ZNF541-201ENST00000263351 ZNF211Q13398 564 aaPredicted RBP18.09■□□□□ 0.49
ZNF541-201ENST00000263351 ZC2HC1CQ53FD0 456 aaPredicted RBP18.09■□□□□ 0.49
ZNF541-201ENST00000263351 PPP4R3AQ6IN85 833 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms