RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ADORA2AP29274 412 aa25.49■■□□□ 1.67
SMARCB1-201ENST00000263121 GPR142Q7Z601 462 aa25.49■■□□□ 1.67
SMARCB1-201ENST00000263121 PLXNA1Q9UIW2 1896 aa25.49■■□□□ 1.67
SMARCB1-201ENST00000263121 CTNND2Q9UQB3 1225 aa25.49■■□□□ 1.67
SMARCB1-201ENST00000263121 NPHP3-ACAD11A0A0J9YXS1 232 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 ZBTB39O15060 712 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 MAPK4P31152 587 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 COASYQ13057 564 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 PSMD2Q13200 908 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 TAF1CQ15572 869 aaPredicted RBP25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 KIAA0895Q8NCT3 520 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 PANK4Q9NVE7 773 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 RWDD2AQ9UIY3 292 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 PCDHA10Q9Y5I2 948 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 IVNS1ABPQ9Y6Y0 642 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 ZNF236Q9UL36 1845 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 COBLO75128 1261 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 TGFB3P10600 412 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 PAK1Q13153 545 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 GIT2Q14161 759 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 GRB14Q14449 540 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 CCDC65Q8IXS2 484 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 RUSC1Q9BVN2 902 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 FANCLQ9NW38 375 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 CPA4Q9UI42 421 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 NFE2L3Q9Y4A8 694 aa25.48■■□□□ 1.67
SMARCB1-201ENST00000263121 ASB14A6NK59 587 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 UBA1P22314 1058 aaKnown RBP25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 PPP1R2P41236 205 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 PSMC5P62195 406 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 SREBF2Q12772 1141 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 STIM1Q13586 685 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 UGCGQ16739 394 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 SPATA1Q5VX52 437 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 RINT1Q6NUQ1 792 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 C4orf19Q8IY42 314 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 NELFBQ8WX92 580 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 HPS3Q969F9 1004 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 MAPK8IP1Q9UQF2 711 aa25.47■■□□□ 1.67
SMARCB1-201ENST00000263121 KRT18P05783 430 aaKnown RBP25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 ZNF75DP51815 510 aa25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 STX17P56962 302 aa25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 ACTR2P61160 394 aa25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 C1orf186Q6ZWK4 172 aa25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 PLEKHH3Q7Z736 793 aa25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 ZNF467Q7Z7K2 595 aaPredicted RBP25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 REEP2Q9BRK0 252 aa25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 TRIM5Q9C035 493 aa25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 DBR1Q9UK59 544 aaKnown RBP25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 WDR81Q562E7 1941 aa25.46■■□□□ 1.67
SMARCB1-201ENST00000263121 ZNF18P17022 549 aa25.45■■□□□ 1.67
SMARCB1-201ENST00000263121 ABHD15Q6UXT9 468 aa25.45■■□□□ 1.67
SMARCB1-201ENST00000263121 CYFIP1Q7L576 1253 aa25.45■■□□□ 1.67
SMARCB1-201ENST00000263121 EEPD1Q7L9B9 569 aa25.45■■□□□ 1.67
SMARCB1-201ENST00000263121 DHTKD1Q96HY7 919 aaPredicted RBP25.45■■□□□ 1.67
SMARCB1-201ENST00000263121 SLC39A2Q9NP94 309 aa25.45■■□□□ 1.67
SMARCB1-201ENST00000263121 KCND2Q9NZV8 630 aa25.45■■□□□ 1.67
SMARCB1-201ENST00000263121 TELO2Q9Y4R8 837 aa25.45■■□□□ 1.67
SMARCB1-201ENST00000263121 PSMA7O14818 248 aa25.45■■□□□ 1.66
SMARCB1-201ENST00000263121 PSAPP07602 524 aa25.45■■□□□ 1.66
SMARCB1-201ENST00000263121 CACNB1Q02641 598 aaPredicted RBP25.45■■□□□ 1.66
SMARCB1-201ENST00000263121 RAD51AP2Q09MP3 1159 aa25.45■■□□□ 1.66
SMARCB1-201ENST00000263121 KCNV1Q6PIU1 500 aa25.45■■□□□ 1.66
SMARCB1-201ENST00000263121 C17orf99Q6UX52 265 aa25.45■■□□□ 1.66
SMARCB1-201ENST00000263121 PCDHA2Q9Y5H9 948 aa25.45■■□□□ 1.66
SMARCB1-201ENST00000263121 MCM3APO60318 1980 aa25.44■■□□□ 1.66
SMARCB1-201ENST00000263121 TLR2O60603 784 aa25.44■■□□□ 1.66
SMARCB1-201ENST00000263121 ATG7O95352 703 aa25.44■■□□□ 1.66
SMARCB1-201ENST00000263121 ATP1A3P13637 1013 aa25.44■■□□□ 1.66
SMARCB1-201ENST00000263121 TM4SF4P48230 202 aa25.44■■□□□ 1.66
SMARCB1-201ENST00000263121 NEDD9Q14511 834 aa25.44■■□□□ 1.66
SMARCB1-201ENST00000263121 FAM26FQ5R3K3 315 aa25.44■■□□□ 1.66
SMARCB1-201ENST00000263121 ARMCX2Q7L311 632 aa25.44■■□□□ 1.66
SMARCB1-201ENST00000263121 FARP2O94887 1054 aaPredicted RBP25.43■■□□□ 1.66
SMARCB1-201ENST00000263121 FBXO16Q8IX29 292 aaPredicted RBP25.43■■□□□ 1.66
SMARCB1-201ENST00000263121 DDX41Q9UJV9 622 aaKnown RBP25.43■■□□□ 1.66
SMARCB1-201ENST00000263121 DIS3Q9Y2L1 958 aaKnown RBP25.43■■□□□ 1.66
SMARCB1-201ENST00000263121 SYNGAP1Q96PV0 1343 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 ARHGEF35A5YM69 484 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 SLC15A5A6NIM6 579 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 ARIH2O95376 493 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 SUPT20HL2P0C7V6 817 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 YWHABP31946 246 aaKnown RBP25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 RARRES1P49788 294 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 MIS18BP1Q6P0N0 1132 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 GUF1Q8N442 669 aaKnown RBP25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 ATP6V0A1Q93050 837 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 ZIC5Q96T25 663 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 SAMSN1Q9NSI8 373 aaKnown RBP25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 GABBR1Q9UBS5 961 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 SORBS3O60504 671 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 DKC1O60832 514 aaKnown RBP eCLIP25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 GUCY2CP25092 1073 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 PMS1P54277 932 aaKnown RBP25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 SP4Q02446 784 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 HERC4Q5GLZ8 1057 aaPredicted RBP25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 CDKAL1Q5VV42 579 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 CCDC62Q6P9F0 684 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 MAMDC4Q6UXC1 1216 aa25.42■■□□□ 1.66
SMARCB1-201ENST00000263121 CCDC60Q8IWA6 550 aaPredicted RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms