RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 SUN1O94901 812 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 NR2F2P24468 414 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 STXBP2Q15833 593 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 HSP90AA5PQ58FG0 334 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 USPL1Q5W0Q7 1092 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 PI4K2BQ8TCG2 481 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 CNOT6LQ96LI5 555 aaKnown RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 NSMCE4AQ9NXX6 385 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 CASQ2O14958 399 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 SPAG6O75602 509 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 CYP19A1P11511 503 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ALAS1P13196 640 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 MKRN3Q13064 507 aaKnown RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 TEDDM1Q5T9Z0 273 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ZNF594Q96JF6 807 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 VPS37BQ9H9H4 285 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 PRKAG2Q9UGJ0 569 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 PITPNM2Q9BZ72 1349 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 CD19P15391 556 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 CYP2C19P33261 490 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 MYBPC2Q14324 1141 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 EDRF1Q3B7T1 1238 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 PHKBQ93100 1093 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 WNT8AQ9H1J5 351 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ACTR5Q9H9F9 607 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 DNAJC17Q9NVM6 304 aaKnown RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 TESPA1A2RU30 521 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 NDUFAB1O14561 156 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 MXI1P50539 228 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 HPS3Q969F9 1004 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 KCNK9Q9NPC2 374 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 TXLNGQ9NUQ3 528 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 MED1Q15648 1581 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 MTSS1O43312 755 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ARID5AQ03989 594 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ANO3Q9BYT9 981 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 NYAP2Q9P242 653 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 GOLGA8IPA6NC78 632 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ACTN1P12814 892 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 RASSF7Q02833 373 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 VSTM4Q8IW00 320 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 ELMOD1Q8N336 334 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 IFT81Q8WYA0 676 aa4.66□□□□□ -1.66
VPS13C-202ENST00000261517 XPO4Q9C0E2 1151 aaKnown RBP4.66□□□□□ -1.66
VPS13C-202ENST00000261517 CHMP2AO43633 222 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 CCDC15Q0P6D6 951 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 TRADDQ15628 312 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USH1GQ495M9 461 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USP28Q96RU2 1077 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 TACC3Q9Y6A5 838 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 LGALS16A8MUM7 142 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 NNTQ13423 1086 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 SEPT6Q14141 434 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 ATG16L1Q676U5 607 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 SEPT12Q8IYM1 358 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 CHST13Q8NET6 341 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 ASNSD1Q9NWL6 643 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 ZBTB1Q9Y2K1 713 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 TNS2Q63HR2 1409 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 LOC102724159A0A0B4J2E5 919 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 GTF2H1P32780 548 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 ZNF131P52739 623 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 PWP2Q15269 919 aaKnown RBP4.65□□□□□ -1.66
VPS13C-202ENST00000261517 ITPRIPL1Q6GPH6 555 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 BEST2Q8NFU1 509 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 SERPINI1Q99574 410 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 NCOA5Q9HCD5 579 aaKnown RBP4.65□□□□□ -1.66
VPS13C-202ENST00000261517 TAB2Q9NYJ8 693 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 SERTAD1Q9UHV2 236 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 FAM187AA6NFU0 413 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 STX17P56962 302 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 PPP4CP60510 307 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 PSMC5P62195 406 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 BFSP1Q12934 665 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 FKBP1CQ5VVH2 108 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 TRIM56Q9BRZ2 755 aaKnown RBP4.65□□□□□ -1.66
VPS13C-202ENST00000261517 ZNF219Q9P2Y4 722 aaPredicted RBP4.65□□□□□ -1.66
VPS13C-202ENST00000261517 CPSF3Q9UKF6 684 aaKnown RBP4.65□□□□□ -1.66
VPS13C-202ENST00000261517 STAP1Q9ULZ2 295 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 IQANK1A0A1B0GTG1 560 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 TMEM110-MUSTN1A8MSY1 372 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L15C9J2P7 530 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L13C9JLJ4 530 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L11C9JVI0 530 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L18D6R9N7 530 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L22D6RA61 530 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L17D6RBQ6 530 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L19D6RCP7 530 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L20D6RJB6 530 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 TRAPPC3O43617 180 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 GYG1P46976 350 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L24Q0WX57 530 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 RASGRF1Q13972 1273 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 SDCCAG3Q96C92 435 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 GJD4Q96KN9 370 aaPredicted RBP4.65□□□□□ -1.66
VPS13C-202ENST00000261517 ACAP3Q96P50 834 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 EHD4Q9H223 541 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 SLITRK6Q9H5Y7 841 aa4.65□□□□□ -1.66
VPS13C-202ENST00000261517 TRIM45Q9H8W5 580 aaPredicted RBP4.65□□□□□ -1.66
VPS13C-202ENST00000261517 KCNH4Q9UQ05 1017 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms