RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PTGISQ16647 500 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 MCTP1Q6DN14 999 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 PLPPR4Q7Z2D5 763 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 NOD1Q9Y239 953 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 PCDHA10Q9Y5I2 948 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 WNT7AO00755 349 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 SMIM10L2AP0DMW4 78 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 SMIM10L2BP0DMW5 78 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 ATP2B1P20020 1258 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 ITGB8P26012 769 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 CLCN1P35523 988 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 LBHD1Q9BQE6 289 aaPredicted RBP18.91■□□□□ 0.62
SDCBP-201ENST00000260130 SAMM50Q9Y512 469 aa18.91■□□□□ 0.62
SDCBP-201ENST00000260130 WDR64B1ANS9 1081 aa18.9■□□□□ 0.62
SDCBP-201ENST00000260130 BACH1O14867 736 aa18.9■□□□□ 0.62
SDCBP-201ENST00000260130 MARCH6O60337 910 aa18.9■□□□□ 0.62
SDCBP-201ENST00000260130 MARK3P27448 753 aa18.9■□□□□ 0.62
SDCBP-201ENST00000260130 SWSAP1Q6NVH7 229 aa18.9■□□□□ 0.62
SDCBP-201ENST00000260130 HAS1Q92839 578 aa18.9■□□□□ 0.62
SDCBP-201ENST00000260130 UNC45AQ9H3U1 944 aa18.9■□□□□ 0.62
SDCBP-201ENST00000260130 C17orf102A2RUQ5 167 aa18.89■□□□□ 0.62
SDCBP-201ENST00000260130 BAG4O95429 457 aaKnown RBP18.89■□□□□ 0.62
SDCBP-201ENST00000260130 TIMP1P01033 207 aa18.89■□□□□ 0.62
SDCBP-201ENST00000260130 PSAPP07602 524 aa18.89■□□□□ 0.62
SDCBP-201ENST00000260130 CYP2C9P11712 490 aa18.89■□□□□ 0.62
SDCBP-201ENST00000260130 SFNP31947 248 aa18.89■□□□□ 0.62
SDCBP-201ENST00000260130 MDM2Q00987 491 aaPredicted RBP18.89■□□□□ 0.62
SDCBP-201ENST00000260130 FAM160B1Q5W0V3 765 aa18.89■□□□□ 0.62
SDCBP-201ENST00000260130 CCDC60Q8IWA6 550 aaPredicted RBP18.89■□□□□ 0.62
SDCBP-201ENST00000260130 AFAP1L1Q8TED9 768 aa18.89■□□□□ 0.62
SDCBP-201ENST00000260130 ZNF302Q9NR11 478 aa18.89■□□□□ 0.62
SDCBP-201ENST00000260130 DISC1Q9NRI5 854 aa18.89■□□□□ 0.62
SDCBP-201ENST00000260130 CHMP2AO43633 222 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 PDCP20941 246 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 MAGEA10P43363 369 aaPredicted RBP18.89■□□□□ 0.61
SDCBP-201ENST00000260130 TRAPPC10P48553 1259 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 SLC26A2P50443 739 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 HIC1Q14526 733 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 KLHL40Q2TBA0 621 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 B3GNT9Q6UX72 402 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 SLFN12Q8IYM2 578 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 BADQ92934 168 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 CTAGE1Q96RT6 745 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 GDF15Q99988 308 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 HIPK3Q9H422 1215 aa18.89■□□□□ 0.61
SDCBP-201ENST00000260130 NOL7Q9UMY1 257 aaKnown RBP18.89■□□□□ 0.61
SDCBP-201ENST00000260130 NEMFO60524 1076 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 GNAT1P11488 350 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 HOXC8P31273 242 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 JAK3P52333 1124 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 ZNF200P98182 395 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-201ENST00000260130 PPP1R12CQ9BZL4 782 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 SETD4Q9NVD3 440 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 NRCAMQ92823 1304 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 MCM7P33993 719 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 CALCRLQ16602 461 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 PDXDC2PQ6P474 469 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 MIER3Q7Z3K6 550 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 RDM1Q8NG50 284 aa18.88■□□□□ 0.61
SDCBP-201ENST00000260130 NOC4LQ9BVI4 516 aaKnown RBP18.88■□□□□ 0.61
SDCBP-201ENST00000260130 MAFBQ9Y5Q3 323 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-201ENST00000260130 ORC2Q13416 577 aaPredicted RBP18.87■□□□□ 0.61
SDCBP-201ENST00000260130 PLCB4Q15147 1175 aa18.87■□□□□ 0.61
SDCBP-201ENST00000260130 CHRDL2Q6WN34 429 aa18.87■□□□□ 0.61
SDCBP-201ENST00000260130 ATP6V0A1Q93050 837 aa18.87■□□□□ 0.61
SDCBP-201ENST00000260130 GABBR1Q9UBS5 961 aa18.87■□□□□ 0.61
SDCBP-201ENST00000260130 VAV3Q9UKW4 847 aa18.87■□□□□ 0.61
SDCBP-201ENST00000260130 CYP2C18P33260 490 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 PPFIA1Q13136 1202 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 PPP2R5CQ13362 524 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 ZNF174Q15697 407 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 TTC38Q5R3I4 469 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 MFSD5Q6N075 450 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 MTMR9Q96QG7 549 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 TRPC6Q9Y210 931 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 RANBP2P49792 3224 aaKnown RBP18.86■□□□□ 0.61
SDCBP-201ENST00000260130 POTEB3A0JP26 581 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 TOB1P50616 345 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-201ENST00000260130 PTK7Q13308 1070 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 POTEBQ6S5H4 581 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 GAS2L3Q86XJ1 694 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 LMBR1Q8WVP7 490 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 TRIM44Q96DX7 344 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-201ENST00000260130 PCDHA12Q9UN75 941 aa18.86■□□□□ 0.61
SDCBP-201ENST00000260130 TREHO43280 583 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 INSRRP14616 1297 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 SYT1P21579 422 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 BMP8BP34820 402 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 ADAM17P78536 824 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 BFSP2Q13515 415 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 TMEM60Q9H2L4 133 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 UMODL1Q5DID0 1318 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 VPS37CA5D8V6 355 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-201ENST00000260130 ATP4AP20648 1035 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 TXKP42681 527 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 GRIK4Q16099 956 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 SERINC5Q86VE9 423 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 CKAP2LQ8IYA6 745 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 TMEM199Q8N511 208 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms