RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 TMC5Q6UXY8 1006 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.33□□□□□ -1.24
TRA2B-201ENST00000259043 DTX3Q8N9I9 347 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 CHST13Q8NET6 341 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 SLC7A14Q8TBB6 771 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 TMEM209Q96SK2 561 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 CBLCQ9ULV8 474 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 DDX3XO00571 662 aaKnown RBP eCLIP7.32□□□□□ -1.24
TRA2B-201ENST00000259043 KCNQ2O43526 872 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 PYGMP11217 842 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 COL6A1P12109 1028 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 MLLT6P55198 1093 aaPredicted RBP7.32□□□□□ -1.24
TRA2B-201ENST00000259043 KIAA2012Q0VF49 1180 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 RGL3Q3MIN7 710 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 C16orf59Q7L2K0 433 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 TXNDC5Q8NBS9 432 aaKnown RBP7.32□□□□□ -1.24
TRA2B-201ENST00000259043 ZCCHC14Q8WYQ9 949 aaKnown RBP7.32□□□□□ -1.24
TRA2B-201ENST00000259043 DVL3Q92997 716 aaPredicted RBP7.32□□□□□ -1.24
TRA2B-201ENST00000259043 FBXW5Q969U6 566 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 CLIC6Q96NY7 704 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 CD244Q9BZW8 370 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 SRPK3Q9UPE1 567 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 PTCH2Q9Y6C5 1203 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 CHD1O14646 1710 aa7.32□□□□□ -1.24
TRA2B-201ENST00000259043 C6P13671 934 aa7.31□□□□□ -1.24
TRA2B-201ENST00000259043 NAT1P18440 290 aa7.31□□□□□ -1.24
TRA2B-201ENST00000259043 GPR19Q15760 415 aa7.31□□□□□ -1.24
TRA2B-201ENST00000259043 CD276Q5ZPR3 534 aa7.31□□□□□ -1.24
TRA2B-201ENST00000259043 MCTP2Q6DN12 878 aa7.31□□□□□ -1.24
TRA2B-201ENST00000259043 LGI4Q8N135 537 aa7.31□□□□□ -1.24
TRA2B-201ENST00000259043 ZSWIM2Q8NEG5 633 aa7.31□□□□□ -1.24
TRA2B-201ENST00000259043 SCLYQ96I15 445 aa7.31□□□□□ -1.24
TRA2B-201ENST00000259043 YTHDC1Q96MU7 727 aaKnown RBP7.31□□□□□ -1.24
TRA2B-201ENST00000259043 NUB1Q9Y5A7 615 aa7.31□□□□□ -1.24
TRA2B-201ENST00000259043 IFT140Q96RY7 1462 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 CCDC163A0A0D9SF12 145 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 ZNF561-AS1K7EIQ3 104 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 MAN2B1O00754 1011 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 CKMP06732 381 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 PDE6AP16499 860 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 IL13P35225 146 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 GDF5P43026 501 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 HMGA2P52926 109 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 ARHGAP36Q6ZRI8 547 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 FAM124AQ86V42 546 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 SSBP3Q9BWW4 388 aaPredicted RBP7.3□□□□□ -1.24
TRA2B-201ENST00000259043 SMURF1Q9HCE7 757 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 DLL4Q9NR61 685 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 NDOR1Q9UHB4 597 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 INVSQ9Y283 1065 aa7.3□□□□□ -1.24
TRA2B-201ENST00000259043 EIF4G3O43432 1585 aaKnown RBP7.29□□□□□ -1.24
TRA2B-201ENST00000259043 FAM90A27PA6NNH2 459 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 EFCAB14O75071 495 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 RASGRP1O95267 797 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 SRGAP2CP0DJJ0 459 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 TACR2P21452 398 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 JAM2P57087 298 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 BMS1Q14692 1282 aaKnown RBP7.29□□□□□ -1.24
TRA2B-201ENST00000259043 NFE2L2Q16236 605 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 VASNQ6EMK4 673 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 BORAQ6PGQ7 559 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 OSTM1Q86WC4 334 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 MBD6Q96DN6 1003 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 DRC1Q96MC2 740 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 WRNIP1Q96S55 665 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 MRPL4Q9BYD3 311 aaKnown RBP7.29□□□□□ -1.24
TRA2B-201ENST00000259043 SCAND2PQ9GZW5 306 aaPredicted RBP7.29□□□□□ -1.24
TRA2B-201ENST00000259043 NCOA5Q9HCD5 579 aaKnown RBP7.29□□□□□ -1.24
TRA2B-201ENST00000259043 CROTQ9UKG9 612 aa7.29□□□□□ -1.24
TRA2B-201ENST00000259043 CCDC66A2RUB6 948 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 MROH6A6NGR9 719 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 C9orf118A6NHY6 69 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 OVOL3O00110 214 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 KCNA6P17658 529 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 LACTBP83111 547 aaPredicted RBP7.28□□□□□ -1.24
TRA2B-201ENST00000259043 SQSTM1Q13501 440 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 PHF19Q5T6S3 580 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 PRAMEF18Q5VWM3 479 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 FGD2Q7Z6J4 655 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 PTRH1Q86Y79 214 aaKnown RBP7.28□□□□□ -1.24
TRA2B-201ENST00000259043 UBXN4Q92575 508 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 KANSL2Q9H9L4 492 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 TRIM39Q9HCM9 518 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 CATSPERZQ9NTU4 200 aa7.28□□□□□ -1.24
TRA2B-201ENST00000259043 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.27□□□□□ -1.25
TRA2B-201ENST00000259043 ZNF839A8K0R7 811 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 CYP7B1O75881 506 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 PTPN1P18031 435 aaKnown RBP7.27□□□□□ -1.25
TRA2B-201ENST00000259043 PFKPQ01813 784 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 SKIDA1Q1XH10 827 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 FIGNQ5HY92 759 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 GLB1LQ6UWU2 654 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 ZC3H7AQ8IWR0 971 aaKnown RBP7.27□□□□□ -1.25
TRA2B-201ENST00000259043 NLGN4XQ8N0W4 816 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 KCND1Q9NSA2 647 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 SFMBT1Q9UHJ3 866 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 TOPBP1Q92547 1522 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 RSF1Q96T23 1441 aaPredicted RBP7.27□□□□□ -1.25
TRA2B-201ENST00000259043 ZNF536O15090 1300 aa7.27□□□□□ -1.25
TRA2B-201ENST00000259043 TCRBV16S1A1N1A0A5B0 115 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms