RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 USP17L6PQ6QN14 398 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.73■□□□□ 0.59
FOXA1-201ENST00000250448 MTMR8Q96EF0 704 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 IFIH1Q9BYX4 1025 aaKnown RBP18.73■□□□□ 0.59
FOXA1-201ENST00000250448 MLXIPQ9HAP2 919 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 FBXO28Q9NVF7 368 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 POLR2AP24928 1970 aaKnown RBP18.72■□□□□ 0.59
FOXA1-201ENST00000250448 SYDE2Q5VT97 1194 aa18.72■□□□□ 0.59
FOXA1-201ENST00000250448 C9orf131Q5VYM1 1079 aa18.72■□□□□ 0.59
FOXA1-201ENST00000250448 GALNT17Q6IS24 598 aa18.72■□□□□ 0.59
FOXA1-201ENST00000250448 UIMC1Q96RL1 719 aa18.72■□□□□ 0.59
FOXA1-201ENST00000250448 C7orf25Q9BPX7 421 aa18.72■□□□□ 0.59
FOXA1-201ENST00000250448 FCER1AP12319 257 aa18.72■□□□□ 0.59
FOXA1-201ENST00000250448 HNRNPH3P31942 346 aaKnown RBP18.72■□□□□ 0.59
FOXA1-201ENST00000250448 NONOQ15233 471 aaKnown RBP eCLIP18.72■□□□□ 0.59
FOXA1-201ENST00000250448 EFCAB13Q8IY85 973 aa18.72■□□□□ 0.59
FOXA1-201ENST00000250448 ZKSCAN4Q969J2 545 aaPredicted RBP18.72■□□□□ 0.59
FOXA1-201ENST00000250448 AK8Q96MA6 479 aa18.72■□□□□ 0.59
FOXA1-201ENST00000250448 LRRC1Q9BTT6 524 aa18.72■□□□□ 0.59
FOXA1-201ENST00000250448 PCDHA13Q9Y5I0 950 aa18.72■□□□□ 0.59
FOXA1-201ENST00000250448 CCNT1O60563 726 aaKnown RBP18.71■□□□□ 0.59
FOXA1-201ENST00000250448 MAP3K10Q02779 954 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 DRC1Q96MC2 740 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 PRR12Q9ULL5 1215 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 MOCS3O95396 460 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 ASNSP08243 561 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 PRLRP16471 622 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 PPFIA1Q13136 1202 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 HDAC7Q8WUI4 952 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 ARHGAP20Q9P2F6 1191 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 DMGDHQ9UI17 866 aaKnown RBP18.71■□□□□ 0.59
FOXA1-201ENST00000250448 PLAGL2Q9UPG8 496 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 NKRFO15226 690 aaKnown RBP eCLIP18.71■□□□□ 0.59
FOXA1-201ENST00000250448 OR52Z1P0C646 297 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 KIF11P52732 1056 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 KRT25Q7Z3Z0 450 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 SPATA4Q8NEY3 305 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 OSBPL9Q96SU4 736 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 HINFPQ9BQA5 517 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 PSTPIP2Q9H939 334 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 GOPCQ9HD26 462 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 HYOU1Q9Y4L1 999 aa18.71■□□□□ 0.59
FOXA1-201ENST00000250448 DICER1Q9UPY3 1922 aaKnown RBP18.7■□□□□ 0.58
FOXA1-201ENST00000250448 CCDC174Q6PII3 467 aa18.7■□□□□ 0.58
FOXA1-201ENST00000250448 VCPKMTQ9H867 229 aa18.7■□□□□ 0.58
FOXA1-201ENST00000250448 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.7■□□□□ 0.58
FOXA1-201ENST00000250448 GOLGA8KD6RF30 607 aa18.7■□□□□ 0.58
FOXA1-201ENST00000250448 IRAK1P51617 712 aa18.7■□□□□ 0.58
FOXA1-201ENST00000250448 ALS2CR12Q96Q35 445 aa18.7■□□□□ 0.58
FOXA1-201ENST00000250448 FAM107BQ9H098 131 aa18.7■□□□□ 0.58
FOXA1-201ENST00000250448 SIK3Q9Y2K2 1263 aa18.7■□□□□ 0.58
FOXA1-201ENST00000250448 MYH10P35580 1976 aa18.7■□□□□ 0.58
FOXA1-201ENST00000250448 ESYT2A0FGR8 921 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 CPP00450 1065 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 TCP1P17987 556 aaKnown RBP18.69■□□□□ 0.58
FOXA1-201ENST00000250448 EIF4A3P38919 411 aaKnown RBP18.69■□□□□ 0.58
FOXA1-201ENST00000250448 STAT2P52630 851 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 COBLL1Q53SF7 1204 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 CNNM4Q6P4Q7 775 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 NFRKBQ6P4R8 1299 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 KIAA0895Q8NCT3 520 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 SH3GL2Q99962 352 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 RIC8AQ9NPQ8 531 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 EPHB6O15197 1021 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 LCA5LO95447 670 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 EPHB4P54760 987 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 VWA3BQ502W6 1294 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 GBP6Q6ZN66 633 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 NEK8Q86SG6 692 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 SEMA6BQ9H3T3 888 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 DEF6Q9H4E7 631 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 ATAD5Q96QE3 1844 aa18.69■□□□□ 0.58
FOXA1-201ENST00000250448 EDIL3O43854 480 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 TDP2O95551 362 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 SKIDA1Q1XH10 827 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 CUL5Q93034 780 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 WRNIP1Q96S55 665 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 CAPS2Q9BXY5 557 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 hCG_1984214I3L0E3 225 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 OPA1O60313 960 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 MATR3P43243 847 aaKnown RBP eCLIP18.68■□□□□ 0.58
FOXA1-201ENST00000250448 CCT5P48643 541 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 AMPD3Q01432 767 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 CCDC181Q5TID7 509 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 HAUS3Q68CZ6 603 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 TADA2BQ86TJ2 420 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 FBXO11Q86XK2 927 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 ZNF713Q8N859 430 aaPredicted RBP18.68■□□□□ 0.58
FOXA1-201ENST00000250448 HPS3Q969F9 1004 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 GJA10Q969M2 543 aa18.68■□□□□ 0.58
FOXA1-201ENST00000250448 FAM207AQ9NSI2 230 aaPredicted RBP18.68■□□□□ 0.58
FOXA1-201ENST00000250448 A0A087WUV0 522 aaPredicted RBP18.67■□□□□ 0.58
FOXA1-201ENST00000250448 AKR1B10O60218 316 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 MRPS25P82663 173 aaKnown RBP18.67■□□□□ 0.58
FOXA1-201ENST00000250448 SLC7A5Q01650 507 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 EMBQ6PCB8 327 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 P2RX7Q99572 595 aaKnown RBP18.67■□□□□ 0.58
FOXA1-201ENST00000250448 SMARCAL1Q9NZC9 954 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 STIM2Q9P246 746 aa18.67■□□□□ 0.58
FOXA1-201ENST00000250448 CENPPQ6IPU0 288 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms