RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 CPVLQ9H3G5 476 aa13.94□□□□□ -0.18
RFPL3-201ENST00000249007 SEMA4AQ9H3S1 761 aa13.94□□□□□ -0.18
RFPL3-201ENST00000249007 C2CD4DB7Z1M9 353 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
RFPL3-201ENST00000249007 CFBP00751 764 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 GOLGA8HP0CJ92 632 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 HOXB8P17481 243 aaPredicted RBP13.93□□□□□ -0.18
RFPL3-201ENST00000249007 ADAM17P78536 824 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 RRP12Q5JTH9 1297 aaKnown RBP13.93□□□□□ -0.18
RFPL3-201ENST00000249007 TSHZ3Q63HK5 1081 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 CWF19L1Q69YN2 538 aaKnown RBP13.93□□□□□ -0.18
RFPL3-201ENST00000249007 CCDC105Q8IYK2 499 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 CRIPAKQ8N1N5 446 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 LINC01599Q8WXQ3 324 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 GPATCH3Q96I76 525 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 HINFPQ9BQA5 517 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 PDCD2LQ9BRP1 358 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 UBA5Q9GZZ9 404 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 DLL3Q9NYJ7 618 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 ANAPC4Q9UJX5 808 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 MRPL11Q9Y3B7 192 aaKnown RBP13.93□□□□□ -0.18
RFPL3-201ENST00000249007 PCDHB12Q9Y5F1 795 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 FOXP2O15409 715 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 ASGR2P07307 311 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 AOC1P19801 751 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 KCNC3Q14003 757 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 FBXO47Q5MNV8 452 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 TAF2Q6P1X5 1199 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 TSHZ1Q6ZSZ6 1077 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 TRIM50Q86XT4 487 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 TCP11L1Q9NUJ3 509 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 CDH22Q9UJ99 828 aa13.93□□□□□ -0.18
RFPL3-201ENST00000249007 ZNF215Q9UL58 517 aaPredicted RBP13.93□□□□□ -0.18
RFPL3-201ENST00000249007 FASNP49327 2511 aaKnown RBP13.92□□□□□ -0.18
RFPL3-201ENST00000249007 MYH6P13533 1939 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 FGRP09769 529 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 STAG3L1P0CL83 205 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 ERVFC1P60507 584 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 MGAT3Q09327 533 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 PDE12Q6L8Q7 609 aaKnown RBP13.92□□□□□ -0.18
RFPL3-201ENST00000249007 LLGL2Q6P1M3 1020 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 RUFY4Q6ZNE9 571 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 RSPH3Q86UC2 560 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 RASGRP4Q8TDF6 673 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 CCDC136Q96JN2 1154 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 NECTIN4Q96NY8 510 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 POMKQ9H5K3 350 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 NRCAMQ92823 1304 aa13.92□□□□□ -0.18
RFPL3-201ENST00000249007 PI15O43692 258 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 FGF18O76093 207 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 CD52P31358 61 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 GATMP50440 423 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 SPOUT1Q5T280 376 aaKnown RBP13.91□□□□□ -0.18
RFPL3-201ENST00000249007 CES5AQ6NT32 575 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 VSIG10LQ86VR7 867 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 DTWD2Q8NBA8 298 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 CYP2W1Q8TAV3 490 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 GPKOWQ92917 476 aaPredicted RBP eCLIP13.91□□□□□ -0.18
RFPL3-201ENST00000249007 TTC14Q96N46 770 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 FTHL17Q9BXU8 183 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 BCAS3Q9H6U6 928 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 AGO3Q9H9G7 860 aaKnown RBP13.91□□□□□ -0.18
RFPL3-201ENST00000249007 AAASQ9NRG9 546 aa13.91□□□□□ -0.18
RFPL3-201ENST00000249007 SCG2P13521 617 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 HSD17B4P51659 736 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 PGM5Q15124 567 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 QRICH1Q2TAL8 776 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 ZMYM1Q5SVZ6 1142 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 PLPP4Q5VZY2 271 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 RTN4RL1Q86UN2 441 aaPredicted RBP13.9□□□□□ -0.18
RFPL3-201ENST00000249007 THNSL1Q8IYQ7 743 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 ADGRF4Q8IZF3 695 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 IL31RAQ8NI17 732 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 TMEM260Q9NX78 707 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 LIMD1Q9UGP4 676 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 R4GN57 208 aa13.9□□□□□ -0.18
RFPL3-201ENST00000249007 FSCN2O14926 492 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 DHX16O60231 1041 aaKnown RBP13.89□□□□□ -0.19
RFPL3-201ENST00000249007 ITIH3Q06033 890 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 METTL7BQ6UX53 244 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 STOX1Q6ZVD7 989 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 TDRD5Q8NAT2 981 aaKnown RBP13.89□□□□□ -0.19
RFPL3-201ENST00000249007 RUBCNQ92622 972 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 ZFP91Q96JP5 570 aaPredicted RBP13.89□□□□□ -0.19
RFPL3-201ENST00000249007 GPR20Q99678 358 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 RTP3Q9BQQ7 232 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 ADAM7Q9H2U9 754 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 ZBTB40Q9NUA8 1239 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 LRFN2Q9ULH4 789 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 CDY2AQ9Y6F7 541 aa13.89□□□□□ -0.19
RFPL3-201ENST00000249007 OPLAHO14841 1288 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 ARP10275 920 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 NPR3P17342 541 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 IBSPP21815 317 aaPredicted RBP13.88□□□□□ -0.19
RFPL3-201ENST00000249007 CCND2P30279 289 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 APOBRQ0VD83 1088 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 ST3GAL2Q16842 350 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 RSPO4Q2I0M5 234 aaPredicted RBP13.88□□□□□ -0.19
RFPL3-201ENST00000249007 UTP14CQ5TAP6 766 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms