RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 DDX39AO00148 427 aaKnown RBP15.78■□□□□ 0.12
SDF2-201ENST00000247020 ATP9AO75110 1047 aa15.78■□□□□ 0.12
SDF2-201ENST00000247020 GAP43P17677 238 aa15.78■□□□□ 0.12
SDF2-201ENST00000247020 STX17P56962 302 aa15.78■□□□□ 0.12
SDF2-201ENST00000247020 CNTN2Q02246 1040 aa15.78■□□□□ 0.12
SDF2-201ENST00000247020 CST9Q5W186 159 aa15.78■□□□□ 0.12
SDF2-201ENST00000247020 CENPPQ6IPU0 288 aa15.78■□□□□ 0.12
SDF2-201ENST00000247020 GPRC5AQ8NFJ5 357 aa15.78■□□□□ 0.12
SDF2-201ENST00000247020 PARK7Q99497 189 aaKnown RBP15.78■□□□□ 0.12
SDF2-201ENST00000247020 MMP19Q99542 508 aa15.78■□□□□ 0.12
SDF2-201ENST00000247020 SAMSN1Q9NSI8 373 aaKnown RBP15.78■□□□□ 0.12
SDF2-201ENST00000247020 ODF2LQ9ULJ1 636 aa15.78■□□□□ 0.12
SDF2-201ENST00000247020 ASTN1O14525 1302 aa15.77■□□□□ 0.12
SDF2-201ENST00000247020 SOWAHBA6NEL2 793 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 LRRC10BA6NIK2 292 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 TGFB3P10600 412 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 PSMC5P62195 406 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 LRRC63Q05C16 580 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 Q3C1V9 767 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 RINT1Q6NUQ1 792 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 TTI2Q6NXR4 508 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 KCNV1Q6PIU1 500 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 C1orf186Q6ZWK4 172 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 ZSCAN30Q86W11 494 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 ABRAQ8N0Z2 381 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 MORC4Q8TE76 937 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 TIPINQ9BVW5 301 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 SLC39A2Q9NP94 309 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 PKD2L1Q9P0L9 805 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 SEL1LQ9UBV2 794 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 SAMM50Q9Y512 469 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 PCDHA2Q9Y5H9 948 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 PCDHA10Q9Y5I2 948 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 COL4A3BPQ9Y5P4 624 aa15.77■□□□□ 0.11
SDF2-201ENST00000247020 MYH9P35579 1960 aaKnown RBP15.77■□□□□ 0.11
SDF2-201ENST00000247020 A0A1B0GTH6 734 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 STRNO43815 780 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 FGFR1OPO95684 399 aaKnown RBP15.76■□□□□ 0.11
SDF2-201ENST00000247020 GUCY2CP25092 1073 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 EEF1GP26641 437 aaKnown RBP15.76■□□□□ 0.11
SDF2-201ENST00000247020 HUNKP57058 714 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 GSDMDP57764 484 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 FAM114A1Q8IWE2 563 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 MYOCDQ8IZQ8 938 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 BANK1Q8NDB2 785 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 TRIM47Q96LD4 638 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 REEP2Q9BRK0 252 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 JPH1Q9HDC5 661 aaPredicted RBP15.76■□□□□ 0.11
SDF2-201ENST00000247020 OLFML3Q9NRN5 406 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 ANKEF1Q9NU02 776 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 SLC9A2Q9UBY0 812 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 LIMA1Q9UHB6 759 aaKnown RBP15.76■□□□□ 0.11
SDF2-201ENST00000247020 ZKSCAN5Q9Y2L8 839 aa15.76■□□□□ 0.11
SDF2-201ENST00000247020 MANSC4A6NHS7 340 aaPredicted RBP15.75■□□□□ 0.11
SDF2-201ENST00000247020 TBCAO75347 108 aaKnown RBP15.75■□□□□ 0.11
SDF2-201ENST00000247020 PSAPP07602 524 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 CYP2C8P10632 490 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 FAM110CQ1W6H9 321 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 FILIP1LQ4L180 1135 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 HERC4Q5GLZ8 1057 aaPredicted RBP15.75■□□□□ 0.11
SDF2-201ENST00000247020 SPC24Q8NBT2 197 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 PIGOQ8TEQ8 1089 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 WRAP73Q9P2S5 460 aaPredicted RBP15.75■□□□□ 0.11
SDF2-201ENST00000247020 MAPK8IP1Q9UQF2 711 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 ARHGEF35A5YM69 484 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 ASB14A6NK59 587 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 PEX10O60683 326 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 CCNE2O96020 404 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 ZNF131P52739 623 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 PPP4R3CPQ6ZMV5 832 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 APTXQ7Z2E3 356 aaKnown RBP15.75■□□□□ 0.11
SDF2-201ENST00000247020 RASAL3Q86YV0 1011 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 ATP6V0A1Q93050 837 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 TSG101Q99816 390 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 RUSC1Q9BVN2 902 aa15.75■□□□□ 0.11
SDF2-201ENST00000247020 PASKQ96RG2 1323 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 ESPNB1AK53 854 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 ATG7O95352 703 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 NEDD9Q14511 834 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 NR1I3Q14994 352 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 TCP11X2Q5H9J9 407 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 VSTM4Q8IW00 320 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 FAM43AQ8N2R8 423 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 CSGALNACT2Q8N6G5 542 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 FGD4Q96M96 766 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 NAP1L5Q96NT1 182 aaPredicted RBP15.74■□□□□ 0.11
SDF2-201ENST00000247020 DUSP9Q99956 384 aaKnown RBP15.74■□□□□ 0.11
SDF2-201ENST00000247020 UBE4BO95155 1302 aa15.74■□□□□ 0.11
SDF2-201ENST00000247020 NPHP3-ACAD11A0A0J9YXS1 232 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 TRIM49BA6NDI0 452 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 KCNJ18B7U540 433 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 EIF3DO15371 548 aaKnown RBP eCLIP15.73■□□□□ 0.11
SDF2-201ENST00000247020 FAM13AO94988 1023 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
SDF2-201ENST00000247020 YWHABP31946 246 aaKnown RBP15.73■□□□□ 0.11
SDF2-201ENST00000247020 RARRES1P49788 294 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 PMS1P54277 932 aaKnown RBP15.73■□□□□ 0.11
SDF2-201ENST00000247020 INHBEP58166 350 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 KCNJ12Q14500 433 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 BMT2Q1RMZ1 405 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms