RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 EN1Q05925 392 aaPredicted RBP10.08□□□□□ -0.8
COL21A1-201ENST00000244728 ANKRD40Q6AI12 368 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 PRR5LQ6MZQ0 368 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 TMC4Q7Z404 712 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 FMNL3Q8IVF7 1028 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 HPS3Q969F9 1004 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 DHX36Q9H2U1 1008 aaKnown RBP10.08□□□□□ -0.8
COL21A1-201ENST00000244728 INTS9Q9NV88 658 aaKnown RBP10.08□□□□□ -0.8
COL21A1-201ENST00000244728 ANKFY1Q9P2R3 1169 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 DMGDHQ9UI17 866 aaKnown RBP10.08□□□□□ -0.8
COL21A1-201ENST00000244728 MYO5BQ9ULV0 1848 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 MYO1FO00160 1098 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 SERPING1P05155 500 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 RCAN1P53805 252 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 SEC24CP53992 1094 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 UAP1Q16222 522 aaPredicted RBP10.08□□□□□ -0.8
COL21A1-201ENST00000244728 SYDE2Q5VT97 1194 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 TAB3Q8N5C8 712 aaPredicted RBP10.08□□□□□ -0.8
COL21A1-201ENST00000244728 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.08□□□□□ -0.8
COL21A1-201ENST00000244728 SH2D3AQ9BRG2 576 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 ZNF341Q9BYN7 854 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 TRIM6Q9C030 488 aaPredicted RBP10.08□□□□□ -0.8
COL21A1-201ENST00000244728 ASIC3Q9UHC3 531 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 CD2APQ9Y5K6 639 aa10.08□□□□□ -0.8
COL21A1-201ENST00000244728 PNMA6FA0A0J9YX94 578 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 NTSR2O95665 410 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 SRGNP10124 158 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 DCAF15Q66K64 600 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 RIMS1Q86UR5 1692 aaKnown RBP10.07□□□□□ -0.8
COL21A1-201ENST00000244728 TMEM139Q8IV31 216 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 FBXL16Q8N461 479 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 UBL4BQ8N7F7 174 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 PPP1R14CQ8TAE6 165 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 ATP6V1G3Q96LB4 118 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 ZIM3Q96PE6 472 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 ANO3Q9BYT9 981 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 EMILIN3Q9NT22 766 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 SERPINA10Q9UK55 444 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 TRPC6Q9Y210 931 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 TDP2O95551 362 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 PLA2G4BP0C869 781 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 SARSP49591 514 aaKnown RBP10.07□□□□□ -0.8
COL21A1-201ENST00000244728 EZH2Q15910 746 aaKnown RBP10.07□□□□□ -0.8
COL21A1-201ENST00000244728 FAM133BQ5BKY9 247 aaKnown RBP10.07□□□□□ -0.8
COL21A1-201ENST00000244728 SEPT14Q6ZU15 432 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 TXNRD3Q86VQ6 643 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 POMGNT1Q8WZA1 660 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 CXorf56Q9H5V9 222 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 RBM12Q9NTZ6 932 aaKnown RBP10.07□□□□□ -0.8
COL21A1-201ENST00000244728 AGTPBP1Q9UPW5 1226 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 SPATA31D1Q6ZQQ2 1576 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 SPATA31A1Q5TZJ5 1347 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 WTIPA6NIX2 430 aaPredicted RBP10.07□□□□□ -0.8
COL21A1-201ENST00000244728 E9PMD0 336 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 F5H6K3 240 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 LIG4P49917 911 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 PLTPP55058 493 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 KLRC3Q07444 240 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 GNPTABQ3T906 1256 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 FAM83BQ5T0W9 1011 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 ARL8AQ96BM9 186 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 CCT8L2Q96SF2 557 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 MTA3Q9BTC8 594 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 PLA2G12BQ9BX93 195 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
COL21A1-201ENST00000244728 DIP2AQ14689 1571 aa10.07□□□□□ -0.8
COL21A1-201ENST00000244728 GMNCA6NCL1 334 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 HNRNPDLO14979 420 aaKnown RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 ECE2O60344 883 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 IFNB1P01574 187 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 LSP1P33241 339 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 CARSP49589 748 aaKnown RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 ZBTB16Q05516 673 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 C12orf60Q5U649 245 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 ZNF772Q68DY9 489 aaPredicted RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 OTUD6AQ7L8S5 288 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 PHLDB2Q86SQ0 1253 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 CROCCP2Q86T23 111 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 DDX12PQ92771 950 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 HOMER3Q9NSC5 361 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 KLC4Q9NSK0 619 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 PLEKHG2Q9H7P9 1386 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 PLEKP08567 350 aaPredicted RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 SLCO1A2P46721 670 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 PPP2R5AQ15172 486 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 SF3B3Q15393 1217 aaKnown RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 ZNF365Q70YC5 407 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 TBC1D16Q8TBP0 767 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 ZNF473Q8WTR7 871 aaKnown RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 PPP1R16BQ96T49 567 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 RIC8AQ9NPQ8 531 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 DKC1O60832 514 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 ATP5DP30049 168 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 MAGOHP61326 146 aaKnown RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 SARNPP82979 210 aaKnown RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 RNF169Q8NCN4 708 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 MAGOHBQ96A72 148 aaKnown RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 HOOK2Q96ED9 719 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 IQCGQ9H095 443 aaKnown RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 DDX47Q9H0S4 455 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms